Protein Info for H281DRAFT_05401 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Cytochrome c, mono- and diheme variants

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 431 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF00034: Cytochrom_C" amino acids 37 to 136 (100 residues), 28.1 bits, see alignment E=6.5e-10 amino acids 195 to 293 (99 residues), 24.3 bits, see alignment E=9.7e-09 amino acids 322 to 406 (85 residues), 44.2 bits, see alignment E=6.3e-15 PF13442: Cytochrome_CBB3" amino acids 319 to 404 (86 residues), 34.2 bits, see alignment E=4.1e-12

Best Hits

KEGG orthology group: None (inferred from 91% identity to bug:BC1001_5671)

Predicted SEED Role

"Putative diheme cytochrome c-553" in subsystem Soluble cytochromes and functionally related electron carriers

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MHM0 at UniProt or InterPro

Protein Sequence (431 amino acids)

>H281DRAFT_05401 Cytochrome c, mono- and diheme variants (Paraburkholderia bryophila 376MFSha3.1)
MKNTLKGFGAALCVALPFLAQTSPASAAASAADQALVQRGAYLAKAGDCAACHTAPKGKP
FAGGLPMNTPMGQIYTTNITPDAQTGIGSYTEQDFARAMREGVAKDGHNLYPAMPYPSYA
KVNDEDMKALYAFFMSGVAPVQQANRESDIKWPMNMRWPLKLWNMVFLEKGVYQNKPGKD
VAWNRGAYLIQGLGHCGSCHTPRGIAFQEKALDETGSAFLTGGLLDNWYATNLTGEHNVG
LGRWSDQDLQAFLKTGANRHASAFGSMTSVINNSTQNLNDGDIAAMTTYLKSLPAVGGNG
APPYKYDPQTTKVSLNRPANDAGARVYTAYCMHCHGVDGRGFAPMLAPLAGNPNVLEKDA
SSLINVTLNGTEDLVIGGIPAPYPMPKYAPVLNDQQIADVLTFVRAGWNNGAPAVTAADV
TKLRKSTQAAR