Protein Info for H281DRAFT_05284 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Predicted arabinose efflux permease, MFS family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 transmembrane" amino acids 22 to 45 (24 residues), see Phobius details amino acids 65 to 87 (23 residues), see Phobius details amino acids 99 to 118 (20 residues), see Phobius details amino acids 125 to 146 (22 residues), see Phobius details amino acids 158 to 179 (22 residues), see Phobius details amino acids 185 to 204 (20 residues), see Phobius details amino acids 237 to 257 (21 residues), see Phobius details amino acids 277 to 299 (23 residues), see Phobius details amino acids 311 to 332 (22 residues), see Phobius details amino acids 338 to 360 (23 residues), see Phobius details amino acids 372 to 395 (24 residues), see Phobius details amino acids 401 to 422 (22 residues), see Phobius details PF07690: MFS_1" amino acids 34 to 250 (217 residues), 105.4 bits, see alignment E=3.1e-34 PF00083: Sugar_tr" amino acids 71 to 223 (153 residues), 77.5 bits, see alignment E=1e-25 amino acids 267 to 430 (164 residues), 38.3 bits, see alignment E=8.2e-14

Best Hits

KEGG orthology group: None (inferred from 94% identity to bpy:Bphyt_4823)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MHF8 at UniProt or InterPro

Protein Sequence (432 amino acids)

>H281DRAFT_05284 Predicted arabinose efflux permease, MFS family (Paraburkholderia bryophila 376MFSha3.1)
MSSLTDRTSAARRRTPLNRSQIAGFWGAWAGWTLDGMDSFIYALVLTPALTELLPRSGYA
ATPANIGLAGSILFALFLVGWGMSFIWGPLADRFGRTKVLAGTIFTFAIFTGLAATSHNV
WELGIYRFIAGVGIGGEWALAGTYVAEAWPEDRRKMGAGYLQTGYYAGFFLAAALNYTIG
VHFGWRAMFLTGAVPVVVAILILLRVKESEKWQKAEAHAERAKPLREILGPAYRRRTWVA
CILLTIAIIGLWAGAVYEPSAVIQLASKAGMAKNDAIKMASLATGLLSIGTILGCLALPP
LAERFGRRKTLAFYFAGMAVAITGSFGWAFYLPNGLAPFIAWLFVLGFFGGNFALFSLWL
PEQFETRVRATAFAFCTSFGRFVGAGVNFLLGAAVLHMHTLGVPVALTALVFVAGLFVIP
FAPETKGEVLPQ