Protein Info for H281DRAFT_05271 in Paraburkholderia bryophila 376MFSha3.1

Annotation: monosaccharide ABC transporter membrane protein, CUT2 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 347 transmembrane" amino acids 16 to 33 (18 residues), see Phobius details amino acids 54 to 73 (20 residues), see Phobius details amino acids 79 to 97 (19 residues), see Phobius details amino acids 105 to 123 (19 residues), see Phobius details amino acids 128 to 147 (20 residues), see Phobius details amino acids 156 to 176 (21 residues), see Phobius details amino acids 182 to 204 (23 residues), see Phobius details amino acids 225 to 244 (20 residues), see Phobius details amino acids 256 to 276 (21 residues), see Phobius details amino acids 282 to 302 (21 residues), see Phobius details amino acids 310 to 332 (23 residues), see Phobius details PF02653: BPD_transp_2" amino acids 52 to 320 (269 residues), 113.5 bits, see alignment E=5.2e-37

Best Hits

KEGG orthology group: K02057, simple sugar transport system permease protein (inferred from 96% identity to bug:BC1001_5550)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MGW6 at UniProt or InterPro

Protein Sequence (347 amino acids)

>H281DRAFT_05271 monosaccharide ABC transporter membrane protein, CUT2 family (Paraburkholderia bryophila 376MFSha3.1)
MKLSNWLARDGVERPLIWPCVTLALLCALNLWVNPHFLSLRMLDGHLFGAPIDVLNRAAP
LVLVATGMTLVIATRGIDISVGAVVAIAGAAAATILATQPVPTGNLIAQALLAALIVGVL
SGMWNGLLVSFVGMQPIIATLILMVAGRGIAQLLTAGQIIPIGAPGYLFVGGGYWLGVPC
SVWIATIAVLATAALVEGTALGLFIRAIGVNPVATRLVGLRSKALVFAVYGFSGLTAAMA
GILISSNVRSADGNNAGLLLELDAILAVTLGGTSLLGGRFSFAGTVLGALIIQTLTYTTY
SIGVPPEATLVVKAAVVLTVSVIQSPAARALAMSVGMQMIKQRGVAR