Protein Info for H281DRAFT_05253 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Acyl carrier protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 86 PF00550: PP-binding" amino acids 7 to 71 (65 residues), 37.1 bits, see alignment E=1.5e-13

Best Hits

Swiss-Prot: 40% identical to AACP_AGRFC: Aminoacyl carrier protein (Atu2571) from Agrobacterium fabrum (strain C58 / ATCC 33970)

KEGG orthology group: None (inferred from 83% identity to bgf:BC1003_1830)

Predicted SEED Role

"Acyl carrier protein" in subsystem Fatty Acid Biosynthesis FASII or Glycerolipid and Glycerophospholipid Metabolism in Bacteria or mycolic acid synthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (86 amino acids)

>H281DRAFT_05253 Acyl carrier protein (Paraburkholderia bryophila 376MFSha3.1)
MKHHVRRILEETACLDVEIDTLGDNDDLYAAGLSSLGTVRVMLAVEEAFGVEIPGSLITH
DMFASIAALAGVIAQLVPEESIATRS