Protein Info for H281DRAFT_05178 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Outer membrane phospholipase A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 449 signal peptide" amino acids 1 to 50 (50 residues), see Phobius details PF02253: PLA1" amino acids 230 to 440 (211 residues), 135.2 bits, see alignment E=1.6e-43

Best Hits

KEGG orthology group: None (inferred from 86% identity to bug:BC1001_1473)

Predicted SEED Role

"Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); Outer membrane phospholipase A"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (449 amino acids)

>H281DRAFT_05178 Outer membrane phospholipase A (Paraburkholderia bryophila 376MFSha3.1)
MHLVASFDRFARRIVVTIRRAHLFPRRNRLTLAFAVFALSGALPGEAAATVAMLQPARIA
AAREPLQLTLLYSADDGHPDGHPLTVTVPQTLRVNLTGGEQAPQPLELAREAGVPDTLRL
RPGQFRKVRFSAPWPESARGEMRIDPVGFDASPALVVINRGPQQEAIAQAERSETQASTP
AQAAATAAALDGPTGDAISPPGDSLSTTGRGVFAHVSYYEPMYFAVGHNGDTNARLQLSF
KYRLRIPDDLRSKAFIDNLYFAYTQTSIWDLSAESRPFRDTTYSPQLFYYVPDTGWRSPL
FTRMGFAAGVAHESNGKGGADSRSINMPFIRPTWEFGDLTANHLTVSPKIYYYFGKESNP
DIADYRGYVDLLVKYGSPDGWQLATTLRKGTKHWYGSVDTQFTYPLAKLLNSAWGGYLWI
GYFNGYGEDLLDYNNRQHWMARIGYSIAR