Protein Info for H281DRAFT_05023 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Predicted ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1692 transmembrane" amino acids 961 to 974 (14 residues), see Phobius details PF07714: PK_Tyr_Ser-Thr" amino acids 92 to 250 (159 residues), 30.4 bits, see alignment E=1.2e-10 PF00069: Pkinase" amino acids 102 to 252 (151 residues), 66.4 bits, see alignment E=1.3e-21 PF13191: AAA_16" amino acids 293 to 486 (194 residues), 97.3 bits, see alignment E=6.5e-31 PF13401: AAA_22" amino acids 316 to 487 (172 residues), 30.1 bits, see alignment E=2.4e-10 PF13185: GAF_2" amino acids 1288 to 1429 (142 residues), 36.4 bits, see alignment E=2.8e-12 PF01590: GAF" amino acids 1288 to 1428 (141 residues), 42.1 bits, see alignment E=5.6e-14 PF13492: GAF_3" amino acids 1289 to 1430 (142 residues), 29.2 bits, see alignment E=4.9e-10 PF00512: HisKA" amino acids 1467 to 1532 (66 residues), 27.1 bits, see alignment (E = 1.5e-09) PF02518: HATPase_c" amino acids 1578 to 1686 (109 residues), 64.5 bits, see alignment 5.2e-21

Best Hits

KEGG orthology group: None (inferred from 69% identity to bam:Bamb_5743)

Predicted SEED Role

"Signal transduction histidine kinase CheA (EC 2.7.3.-)" in subsystem Bacterial Chemotaxis or Flagellar motility or Two-component regulatory systems in Campylobacter (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1692 amino acids)

>H281DRAFT_05023 Predicted ATPase (Paraburkholderia bryophila 376MFSha3.1)
MIELSNRSFIELGNGSPRLQRAVADGASSVLVAGRGSGAPAVLAALQREYALRAALHETW
SAVPQALVPHGEGALLLLADPGGEPLRCCSGSRQAGTAAFLKIAIGLARAVGAMHAAGIV
HRALSPARFLVNDEGQTFLTGFGSATRPGDNTASPDADLEWNDGSFIYMAPELGARMNVP
VDERADLYSLGCIFYQLLTGMPPFEAADTAARVHAHATHRPRPPYELAADVQPQISRIVM
KLLEKAPEQRYADAAGLLADLHRCEDLQRRHGEIAPFTLDTHAALQRLQQGDRVLGRDDE
IEALLAQFRAVVDGRQARVAWVSGSSGIGKSTLLQEAVARMQRVSPPLLAVSKSEEGHRG
KPYAILGQALEQLLRFVLGCPDGEFAIWRERIATATAPVGRTLSTFLPALGAVLGPQPEA
LDPPDAAPALERERVLQGIARLIACFANGARPLVLVLDDLQWADTGTLQVLERLLHQHSD
AALLLIGAFRDNEVPADHPLRAGKLADVAAARHVQLGPLNEGALRELIARALHQDADSLG
PLVEMIGRKTGRNPFFAHHLLRLLADDGLLEYDVESSAWRWSLEQMTAQRGVDNVVELLA
RKLGQLPAATQLMLRVLACLGQRASTSTLAVAAGLSELDATRHLQPALEAGTVYRENGDW
VFWHDRIREATYASMPAAERAELHLQIARRQLANRGGETDVFALAAQANLARPALDDSDE
RRVFARLNLDAGREAKAATAHDSSLGFFRAALDLLGDQAASEDGLLARKLCGEAEFMTGA
LEVAEARLSALEAEAGDGIFGADLARLRAALYTTLGRYDLALGVGLAFLHRAGIEVPMHP
VDADVDREYARLRSWLDQHGIAGLRELPIIADPLRRAITDIISDLIPPALYTDQNLVDFM
LLRSVNLAIEHGHSDAAANVFTCMNQIFGVRYGDYSFSLPFGQLALHLVDERGLVRYRAR
VYMVFGTFVVPWTLPARSARDYVRRAYNVAIESSDHTFALYCGRNEATGMLFAGELLADV
RETVARALASARDANFQLVIDALLSQWALLTHLQEGEPDGRVEMPPVPVDGRPTTLVDFS
YWVYRLQRALLFGDLADALESRQRAEACANASRSFAESGELPFYGALALLALPERDAAQE
AALQRHAGQLAIWARACPENFVGRCELVHAEMARVEGRALDALESYAKAVAHARRHGFTQ
VEALAAELAASFHAARGEEVSAQAYLRHARGAWQRWGAMAKARQLQTGHPELFDADMDAP
AASRLQELDVQAVLRISNALASDIVPARLVETLLRTALESAGAGQGALVLLRRGVWQVPA
RAQVVNGGIAVTQEAVPFTSDVLPVSLVQAVARTQEGVVADDPHDSPVYAQDVYIRRKRP
RSVLCVPLMRYSTLVGVLYLENDLAAKVFTAAKAAVLEVIASQAAFALENARLYDDLVEQ
NEQRARAEEQLRAALTDLARATRLKAMGELVASIVHEVGQPLAAVDTSASAALRWLSRSP
PEIGEAQQMLTHISRSATRAKSIIEALRAKARKAEPQFTRIDLSEALREAAALVAAHLDT
LNVTLELRGLNEPVYVHGDRVQLQQVAINLLTNGAESMAALDTGRLLVLACTKGADGTVQ
VTVDDLGSGIAPEVADRLLEPLFTTKDNGMGMGLAISHSIVDAHGGTLTLAPREVTGTRA
RFVLPRLDAEGT