Protein Info for H281DRAFT_04975 in Paraburkholderia bryophila 376MFSha3.1

Annotation: NTE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 412 PF01734: Patatin" amino acids 44 to 257 (214 residues), 95 bits, see alignment E=7.1e-31 PF12536: DUF3734" amino acids 294 to 399 (106 residues), 142.4 bits, see alignment E=6.2e-46

Best Hits

KEGG orthology group: K07001, (no description) (inferred from 94% identity to bug:BC1001_1136)

Predicted SEED Role

"Ferredoxin reductase" in subsystem Anaerobic respiratory reductases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5ME74 at UniProt or InterPro

Protein Sequence (412 amino acids)

>H281DRAFT_04975 NTE family protein (Paraburkholderia bryophila 376MFSha3.1)
MAQRNLKRARVGAAGNEEGAGASAASASARGKRVQLPAYETIALTLQGGGALGAYQAGVF
QGLHEAGVEPNWLAGISIGALNTAIIAGNPPEKRVERLLQFWETICQPAFGLPLPAFIEH
AFFNSSDAVRKAFTATQAVGALVEGQKGFFVPRFPPPLPTVSGPPQAASYYDTAPLKATL
ESLCDFDRINSREMRVSVGAVNCGTGNFAYFDNTQTTLRAEHFMASGALPPGFAAVEIDG
QYYWDGGLMSNTPLYEVIQTTPRRDTLAFQVDLWSAIGPVPDNITDVQGRMKDIQYSSRT
RLVTDMLQRSQRFRHVLREVLDRVSPDQRDDPWCKLAEDLSCSKRYNVIHLIYRQKEYEG
HYKDFQFGLSTMREHWESGLADIRHSLSQPDWLAMPDNDAGFVTHDIHRDSR