Protein Info for H281DRAFT_04912 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyltransferase family 9 (heptosyltransferase)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 574 PF13432: TPR_16" amino acids 15 to 76 (62 residues), 21.5 bits, see alignment E=1.8e-07 amino acids 52 to 111 (60 residues), 23.2 bits, see alignment 5.4e-08 amino acids 85 to 142 (58 residues), 19.4 bits, see alignment 8.5e-07 amino acids 119 to 181 (63 residues), 33 bits, see alignment E=4.6e-11 amino acids 187 to 234 (48 residues), 29.1 bits, see alignment 7.5e-10 amino acids 226 to 267 (42 residues), 30.2 bits, see alignment 3.4e-10 PF14559: TPR_19" amino acids 23 to 83 (61 residues), 31.3 bits, see alignment E=1.5e-10 PF13431: TPR_17" amino acids 136 to 167 (32 residues), 25 bits, see alignment (E = 1.1e-08) amino acids 204 to 235 (32 residues), 28.8 bits, see alignment (E = 6.6e-10) PF13424: TPR_12" amino acids 146 to 211 (66 residues), 35.5 bits, see alignment E=6.7e-12 PF00515: TPR_1" amino acids 147 to 180 (34 residues), 30.7 bits, see alignment (E = 1.4e-10) amino acids 181 to 214 (34 residues), 35.8 bits, see alignment (E = 3.4e-12) amino acids 215 to 247 (33 residues), 38.9 bits, see alignment (E = 3.6e-13) PF13181: TPR_8" amino acids 147 to 178 (32 residues), 16.4 bits, see alignment (E = 5.8e-06) amino acids 181 to 212 (32 residues), 21.6 bits, see alignment (E = 1.3e-07) amino acids 216 to 247 (32 residues), 26.6 bits, see alignment (E = 3e-09) PF07719: TPR_2" amino acids 147 to 179 (33 residues), 27 bits, see alignment (E = 2.3e-09) amino acids 181 to 213 (33 residues), 29.3 bits, see alignment (E = 4.2e-10) amino acids 216 to 247 (32 residues), 32.1 bits, see alignment (E = 5.1e-11) PF13176: TPR_7" amino acids 183 to 212 (30 residues), 14.6 bits, see alignment (E = 2e-05) amino acids 217 to 246 (30 residues), 19.5 bits, see alignment (E = 5.6e-07) PF13414: TPR_11" amino acids 227 to 263 (37 residues), 33 bits, see alignment 2.7e-11 PF01075: Glyco_transf_9" amino acids 479 to 516 (38 residues), 23.1 bits, see alignment 2.9e-08

Best Hits

KEGG orthology group: None (inferred from 82% identity to bxe:Bxe_A3016)

Predicted SEED Role

"FOG: TPR repeat"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (574 amino acids)

>H281DRAFT_04912 Glycosyltransferase family 9 (heptosyltransferase) (Paraburkholderia bryophila 376MFSha3.1)
MKKPANLAQQLDHMLRQAVALQQNGALAVAQELYREILELRPRHFDALQLLGALALQSGR
IEEGVDLLARALAVNPKQAAVHSNLAYALNALHRFDQALASANRALALQPQFPDALNNRG
NAQAGLDRPLDALASFDRAIALAPDFAQAWNNRACVLRDLGRPADALASCDRALALQPGY
AEAWSNRGNALSDMNEPHEAERSYQRALELAPGFVDAWNNLGLTQIDQGRHEQALASYQR
ALALNPEAAETHWNEALCLLQLGQLEAGWRKYEWRWERSRIKASRRVIAQPLWLGDFSLD
GKTILLHAEQGLGDTLQFCRYAAMVSKLGAKIILEVQPELRRLMSTLDGADQIVEAGEPL
PPFDCHCPLLSLPLALGTSPGSIPSTTPYLSAEPAAARAWGERIDADARGRLKVGLVWAG
GNRPHVAELRKNDARRSLTFARFAPLLDVPNVQFFSLQKGPAAQQLTVGECAAHIVDHTG
ELHDFADTAALVANLDLVISVDTSTAHLAGALNRPVWILNRFDTCWRWMLERSDTPWYPR
ARLFRQPSLGDWDSVMETVRAALADHALAWTGVD