Protein Info for H281DRAFT_04906 in Paraburkholderia bryophila 376MFSha3.1

Annotation: iron complex outermembrane recepter protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF07715: Plug" amino acids 81 to 193 (113 residues), 62.3 bits, see alignment E=5.9e-21 PF00593: TonB_dep_Rec" amino acids 383 to 860 (478 residues), 153.1 bits, see alignment E=2.4e-48

Best Hits

KEGG orthology group: K02014, iron complex outermembrane recepter protein (inferred from 94% identity to bgf:BC1003_5810)

Predicted SEED Role

"Outer membrane receptor proteins, mostly Fe transport" in subsystem Hemin transport system

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MDZ7 at UniProt or InterPro

Protein Sequence (900 amino acids)

>H281DRAFT_04906 iron complex outermembrane recepter protein (Paraburkholderia bryophila 376MFSha3.1)
MKQRALALAIKRMLWAELALSAAMAAPAFAQSQPATTGNTAATTTSEATPTATDSGNVTK
MQRVEVTGSLIRTSDKVGNTEVQTITPKEIEQSGYTTVADFLRGTSANSGSSWGQTTMNS
SAQGGGGIALRGLSEKYTLVLVDGQRVANYGKAVNFTDTFFDVNSIPLNMVDHIDIVKTG
AVSVYGSDAIAGVVNIITKKNFQGLQFDGQLGKAQHPGDAQGNFGVLGGFGDLNSDRFNV
TAAASYYRDTGSSLADRSMTANQDFSQFPGGLAGPLGPNQQSYWTAPDGTKTALNPCPPG
SVSADGGAECKSNPASTTSLVPSTTRLNAKVRGTFKINDDVQAYADLWVSRNETVQNEGP
AALSSITNAYNPATGSALPLSRTVPGTNPYNPFGAPAQINYTFPNTISADTVSTFWRAMT
GVKGSFTTQKFGDWDWSADYGHSQSTVDTTYRNMLNVAGVENILQNGVYDFANPSATPNG
LNGVFQNDYEQAISKLDSVTAKTSTGNLFNLPGGPVGVGFGTEFRHESSLINSRTYTVQG
ITAPANVQTVDGERNVAAVYYQVDIPIIRNLTFTQAGRYDHYSDFGGAFSPSFALRFQPV
QALTAFASYSRGFRAPTLVENSQATYLAHQNLVDPNDPSGSSTKRFTTEQVNGNPNLQPE
HTKNYNIGFQLSPDSSTDIGAAFYKIHIDGVIGTNDPNAVMNANDPSTVIRNADGTVAYI
KEQFVNLGSLDTDGFDMNFRKSVGTKYGTFTLAGDWAYVWHFKLNSPGAPTQDFAGNNLA
LLQPFGASNPRWKGNTSLSWDYRKLTTTLTWQYTGPYTNAVASEFGDGGTLSVASYSQFN
LMATYRGFKHWTIYGGINNIFDRKPPFDVEWQATPDITGYDQSLYTNIGRFFQVGATYRF