Protein Info for H281DRAFT_04891 in Paraburkholderia bryophila 376MFSha3.1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 983 transmembrane" amino acids 37 to 56 (20 residues), see Phobius details

Best Hits

Predicted SEED Role

"Extracellular Matrix protein PelA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (983 amino acids)

>H281DRAFT_04891 hypothetical protein (Paraburkholderia bryophila 376MFSha3.1)
MPLGIQTIGGARRALRNGPGGETMPARLKRGRAQPRLMRVSECALLAALAIVYGSANAQS
TAPQSRSATLPTTPLAQAEARTAQAGPFASVNLAFFDGANVPVDLLQAFDAVVVDPSHGF
DPSANPLRHTVWLARTGANAAASTPGAFVASVIEPLWQRGYRGFLLDTPQALASIDAIRA
AHPDSRIVIGGDDALKLAAPHAKALYAVVGPSLVSGASASGAGQIVVSADDRAARVAAAQ
AFMRQTGVPVVSIEYCAAEDRACARRTAAQVVATSVTPYVTDVARDVVGIGAIEVLPRKV
LVVQDTGEDLLLDETPGVRDLAMPLNYLGYDVEYANVNDTLPDDITPDRYAGVVAWLQGS
GTQDSAVWRRWVDARIAAHVPVAFLGQFGFDAAEDEGRALDLQAVPGPFSDKVDVVSRDP
MIGFEIDPKLGPRDLTGVQVGSASRPLLRVKSGQATLDPVAITPWGGFAMSPYTVVSLNG
IDQERWAIQPISFLTAALRLQQMPSPSVTTENGRRLFMSHVDGDGFASRAEFPGADYSGE
ALYQQIFTRYKVPMTLSVIEGEVGPTGLYPKISPRLEEIARKMFALPYVAIGTHTYSHPF
DWGSVDAKTGERVDRGGGDTAFSLNIPNYTFDIDREVTGSIDYINTRLAPPGKKTTILQW
PGNCKPPAVVVRKVYAAGVANVNGGDTVITKSASSWTNIAPIGVDKGPGAYQVYAPNQDE
NVYTNDWLGPFYGFTRVLETFDMTDKPLRFKPIDLYYHMYSGTKVASLRALDQIFTAVLK
QAVLPVQMTDYTQKVLDWRSFAVARAVRGDVDADAGAGAGAGADGGKRADGDWIVRGNGD
VRELHWPLSTAPDLRASAGVTGYAAGPDGTYIHIADGAARVSFNGADARDSASGALSKAA
ALPYIAEANGFVRNFRRGANGMSFEFGGYYQPFVRLAQAGSCSVNVAGRPVAVHRDAAGL
RFDTPASAGLEVNYQPVEISCER