Protein Info for H281DRAFT_04844 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyltransferase, GT2 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 632 transmembrane" amino acids 497 to 511 (15 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 81 to 201 (121 residues), 37.1 bits, see alignment E=6.3e-13 amino acids 341 to 561 (221 residues), 55.8 bits, see alignment E=1.2e-18 PF00535: Glycos_transf_2" amino acids 85 to 245 (161 residues), 90.3 bits, see alignment E=2.9e-29 amino acids 342 to 461 (120 residues), 65.4 bits, see alignment E=1.3e-21

Best Hits

KEGG orthology group: None (inferred from 83% identity to bph:Bphy_2296)

Predicted SEED Role

"Glycosyl transferase, group 2 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (632 amino acids)

>H281DRAFT_04844 Glycosyltransferase, GT2 family (Paraburkholderia bryophila 376MFSha3.1)
MKRYVNLARRVIGLVRRDGAYSLWKRSLAVYSREGLTGLRRRAGNSAISGRDYADWIELY
DRLDEGARSLIQLEIAAMAMPPRISVVMPTYNADPVWLAEAIDSVRNQIYPHWELCIADD
ASTSAKVRPLLERYMQEDARIRVVFRAKNGHISAASNSALELVTSDWVGLLDHDDLLAQH
ALYCVAKEIARKPDARLIYSDEDKIDVNGRRHEPYFKCDMNIDLFYSHNMISHFGVYQKR
LLDEIGGFRVGLEGSQDYDLALRCLERIGPEAIAHIPRVLYHWRVHPSSTAASGDAKPYA
VVAGERALNEHFGRRGIDGSVEGLAYGYRARYGLPEHRPLVSLIIPTRNGVNLLKQCVDS
IRIKTTYAPYEIIVVDNGSDEKATLDYLHGLASADNIRVIRDHRPFNYSALNNSAIASAN
GEIIGLINNDIEVISDRWLDEMVSLAIQPGIGAVGAKLLYPDGRIQHAGVVVGMGGVAGH
AHRLFPRDSFGYFSRNALISSFSAVTAACLIVRKAIYEQVGGLNEVDLTVAFNDVDFCLR
VRQAGYRNVYTPYAELYHHESATRGTEDNPEKKARFAREVAYMHQRWSESLRYDPAYSPN
LALDRTDFSLAWPPRVEPLTGHAAPHENKELA