Protein Info for H281DRAFT_04792 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyltransferase involved in cell wall bisynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 368 PF13439: Glyco_transf_4" amino acids 2 to 163 (162 residues), 65.4 bits, see alignment E=2e-21 PF13477: Glyco_trans_4_2" amino acids 3 to 122 (120 residues), 30.3 bits, see alignment E=1.4e-10 PF13579: Glyco_trans_4_4" amino acids 3 to 159 (157 residues), 60.8 bits, see alignment E=6.3e-20 PF00534: Glycos_transf_1" amino acids 170 to 319 (150 residues), 70.2 bits, see alignment E=4.9e-23 PF13692: Glyco_trans_1_4" amino acids 177 to 292 (116 residues), 54.8 bits, see alignment E=3.9e-18 PF13524: Glyco_trans_1_2" amino acids 254 to 335 (82 residues), 26.3 bits, see alignment E=2.1e-09

Best Hits

KEGG orthology group: None (inferred from 63% identity to bam:Bamb_3626)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (368 amino acids)

>H281DRAFT_04792 Glycosyltransferase involved in cell wall bisynthesis (Paraburkholderia bryophila 376MFSha3.1)
MLTELCNRAAAIGAHVTVLYSTRPETPKNFIELFHPKVDLVHVSMCRDVHVRKDWASVWE
LARHIRRCDPTVIHLHSSKAGVLGRAAARIATQNAKVLYSPHGLAFLRRDVSRAKQLAYL
MFERMADMMGGTVVACSPGELREIEEKVRVKDATLIENGVDISSIPLRKNREDENVVVGM
NGRASFQKHHELFISLANTLHDATTRFVWIGGNSEELPDASQASALTCSGWLTRSRALSL
MSELDIYVQTSRWEGMPVALIEAQVAGIPAVVTDVVGNRDVVVHGVTGFVGSDEEMPGYL
KQLRGDRKLREQMGAAARELAVAKFSMDTIFHRWLNTYESSGEKHVKEVLDTHSIVPCDI
QPNPDKSL