Protein Info for H281DRAFT_04788 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyltransferase involved in cell wall bisynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 357 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13439: Glyco_transf_4" amino acids 13 to 169 (157 residues), 71.3 bits, see alignment E=2.6e-23 PF13579: Glyco_trans_4_4" amino acids 14 to 164 (151 residues), 55.7 bits, see alignment E=1.9e-18 PF20706: GT4-conflict" amino acids 124 to 289 (166 residues), 45.7 bits, see alignment E=1.2e-15 PF13692: Glyco_trans_1_4" amino acids 183 to 323 (141 residues), 83 bits, see alignment E=6.5e-27 PF00534: Glycos_transf_1" amino acids 183 to 329 (147 residues), 78.9 bits, see alignment E=8.5e-26

Best Hits

KEGG orthology group: None (inferred from 89% identity to bug:BC1001_0535)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (357 amino acids)

>H281DRAFT_04788 Glycosyltransferase involved in cell wall bisynthesis (Paraburkholderia bryophila 376MFSha3.1)
MRVFHLVLAPRLSGAEVLAKDLALDQCAGGMAVCVGSLLPAHDDFASLASELQAHGVQCW
FPQKRHHAARKLWNLFVAVRRFRPDVIFAHATIPSFYARALPLGVPVVYVMHSATNDFER
PLFRRIEHLLSGRASVVIGVSQQGVTDYIQAIGVHPSMTVVPNGVDLARFAFTDGAQRAA
SVPQIVQIGRYASVKNQLLTVRAFGEVLKQIDDARLVLYGVVEDPDYQRAVVALATELGI
AERVVVAGPRSDVATVLSESNVFVMPSRSEGHSVAFLEALASGVPIVASRIPAFAFANGF
PGVQLVDADNVSVYADAIVKALSEKRVQRSLAGLTLRDTAERYRAIARQVCPAVSAR