Protein Info for H281DRAFT_04747 in Paraburkholderia bryophila 376MFSha3.1

Annotation: aspartate-alanine antiporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 560 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 34 to 55 (22 residues), see Phobius details amino acids 61 to 81 (21 residues), see Phobius details amino acids 88 to 110 (23 residues), see Phobius details amino acids 160 to 182 (23 residues), see Phobius details amino acids 382 to 399 (18 residues), see Phobius details amino acids 405 to 425 (21 residues), see Phobius details amino acids 446 to 464 (19 residues), see Phobius details amino acids 470 to 492 (23 residues), see Phobius details amino acids 504 to 525 (22 residues), see Phobius details amino acids 532 to 556 (25 residues), see Phobius details TIGR03802: aspartate-alanine antiporter" amino acids 3 to 555 (553 residues), 661.7 bits, see alignment E=9.6e-203 PF06826: Asp-Al_Ex" amino acids 13 to 174 (162 residues), 90.6 bits, see alignment E=1e-29 amino acids 390 to 552 (163 residues), 111 bits, see alignment E=5.8e-36 TIGR01625: AspT/YidE/YbjL antiporter duplication domain" amino acids 390 to 540 (151 residues), 88.1 bits, see alignment E=5.3e-29

Best Hits

KEGG orthology group: None (inferred from 89% identity to bxe:Bxe_A3893)

Predicted SEED Role

"putative transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MA79 at UniProt or InterPro

Protein Sequence (560 amino acids)

>H281DRAFT_04747 aspartate-alanine antiporter (Paraburkholderia bryophila 376MFSha3.1)
MTSELLRTQPEIALFTSLAIGYLIGSFRIGPIQLGGVCGTLIVALLLGQTGARLAPDLKN
IAFALFIFALGFTGGPQFFANIGRGWRYGLLSVVEIVSVLVLIMIAVTVMRLDAGTAAGL
LAGAATESAVIGTASEAIARLGFDEAQTLRLQANIVTAYSVSYLFGLVTIVLFTSQFAPL
LLRVDLREEAARVWRKLGGDGALGEGQHAAAPALVGRVFRVGAAHGATVLTIEQQHGFNL
TIEQVRRHGANVPVDPHLALASGDIVLVAGRREAIVAAAPDLGDEVDGAGFGQVLAEKLD
VVLTRRDAHGLTVAQMRERAPPDEARGVYIAAVTRLETTIPALPGTELNRGDVLTLVGAK
ADVERGARRLGYVLVATQKTDFVYLGLGVLVGMAIGHLGGRIGGVSLALGTGGGCLLSGL
LFGWIRSRHPLVGSLPPAAAQILKDFGLATFIAAVGLSAGPDAIKLVREYGLALPVAGIL
MVLVPGLLSLWIGRMFLKLETPMLLGAIAGQQCSTPAISALVGVTGNSTPVIGYTITYAL
SNIFLPLMGPVVVGLAGKLS