Protein Info for H281DRAFT_04701 in Paraburkholderia bryophila 376MFSha3.1

Annotation: molecular chaperone DnaJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 380 TIGR02349: chaperone protein DnaJ" amino acids 5 to 356 (352 residues), 458.6 bits, see alignment E=8.8e-142 PF00226: DnaJ" amino acids 5 to 67 (63 residues), 103.2 bits, see alignment E=9.4e-34 PF01556: DnaJ_C" amino acids 126 to 339 (214 residues), 181 bits, see alignment E=2.4e-57 PF00684: DnaJ_CXXCXGXG" amino acids 153 to 213 (61 residues), 65.4 bits, see alignment E=6.6e-22

Best Hits

Swiss-Prot: 99% identical to DNAJ_PARXL: Chaperone protein DnaJ (dnaJ) from Paraburkholderia xenovorans (strain LB400)

KEGG orthology group: K03686, molecular chaperone DnaJ (inferred from 99% identity to bxe:Bxe_A3960)

MetaCyc: 60% identical to chaperone protein DnaJ (Escherichia coli K-12 substr. MG1655)
1.8.4.-

Predicted SEED Role

"Chaperone protein DnaJ" in subsystem Heat shock dnaK gene cluster extended or Protein chaperones

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M9F1 at UniProt or InterPro

Protein Sequence (380 amino acids)

>H281DRAFT_04701 molecular chaperone DnaJ (Paraburkholderia bryophila 376MFSha3.1)
MAKRDYYEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEEHFKEVKEAYEMLSDS
QKRAAYDQYGHAGVDPNMGGAGAQGFGGFADAFGDIFGDIFGQAAGGAARGGGGRAGPQV
YRGADLRYSMEITLEQAAHGYDTQIRVPSWVSCEVCHGSGAKPGTKPETCPTCSGSGAVR
MSQGFFSIQQTCPKCHGTGTYIPEPCAHCHGAGKVKETKTLEVKIPAGIDDGMRIRSAGN
GEPGINGGPSGDLYVEIHIKQHSVFERDGDDLHCQMPIPFTTAALGGEIEVPTLAGRASF
TVPEGTQSGKTFRLRGKGIKGLRSSIAGDLYVHVQVETPVKLTEPQRDLLKQFEKALVEG
GARHSPQSKSWFDRVKSFFD