Protein Info for H281DRAFT_04690 in Paraburkholderia bryophila 376MFSha3.1

Annotation: TIGR02099 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1395 transmembrane" amino acids 32 to 55 (24 residues), see Phobius details amino acids 1327 to 1352 (26 residues), see Phobius details TIGR02099: TIGR02099 family protein" amino acids 29 to 1381 (1353 residues), 652.8 bits, see alignment E=5.5e-200 PF13116: DUF3971" amino acids 587 to 875 (289 residues), 147.8 bits, see alignment E=5.1e-47 PF13502: AsmA_2" amino acids 1120 to 1373 (254 residues), 226.6 bits, see alignment E=3.5e-71

Best Hits

KEGG orthology group: None (inferred from 90% identity to bgf:BC1003_0454)

Predicted SEED Role

"FIG005080: Possible exported protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M8B1 at UniProt or InterPro

Protein Sequence (1395 amino acids)

>H281DRAFT_04690 TIGR02099 family protein (Paraburkholderia bryophila 376MFSha3.1)
MSERNESADPQETGQARPLSGSDHVVLRRTLHVVLALALVLYFIAAGLYLGLRYVVLPRA
DAFRPRIEAAVSEKLHAQFTIGKLAPHWTGFQPGLDITNLVIRDREGKPALTIPHATASL
SWRSLWQFYPTLSSLIVDQPDVLIARGGDGELSVAGVPVPTRHSGNDTLSTWLVRQQAIV
VRGGVLRWRDVQRDEPELALRDIRIAILNDGYDHRLALQAPPDGRLLHGPIDFRTHFRHT
PLAAIGKPINWKGQAYVSTGPVDLPTLARYVRFPIETFAGRIDNAIWVDFADGRMKSASG
QMAGADVALRVRPTQPKLLVPVAHFGWRMEADQGDYKLQLSDMRAELGQPPLEDGTPLTR
TLTFNTLDGRYRKASQQNGQLMSVSGDRVDLGILAEFSRALPLPRPLLNGLVRFNPRGIV
ANYLIEVERGKPESGEPGGDRHATGAEPVERYRFKGDLQGISFAAQEPPPGLTARNHPRA
GIPGIENLWGTVDADQRHGTALLDTSNVAITLPGVFDDPRLKLDHLHGRADWTIGKKAPG
DNHPAFTVKLADFGVSNADVAASATADYSNPGHGRGSLDLKADFERAQVSRIARYLPTSI
SEKLRIYLGHGLQAGMSRGATIEIHGDLTKFPYSRDPDAGVFHIVAPFKGGKFDPSPYPP
RKMRNGTPNVWPPLDGIDGVFELKEKMLRFDIDRARYKRVALHGVNGRIEDLGTRESNLV
IKGDGLGPLADMLDYVNESSLGIMARHQTEKIRAEGPASLALKLTVPRTPKPHIGVEGAI
GFENNRLTVENVPPLSQVRGKVHFTERSAQTDRLTAQFLGGDLRASGGLKQDGTYALDLD
GHLAVDAARGLGLHGPAAQVLSRMSGSAPYALNVSGAKGRLPQLTMNSDLTGLALDFPAP
FNKPVGAPMPLRLAAGPSTVAGESGLERAELNFGPIAARYLLDYKPKSPPTVLRGAIGVN
RPADLPSEGVIAAVDLEAFDADAWRALVTQMRNKEAPAASATPSTPNPTVAQFLPSRFAL
HIGTLTLLKRHWDSVIVGASHADGKWQANIASNQVSGHVSWLPGADKASPGTLQARFARV
VIPSVADKDLLGQAISAPAQNMPSIDLVVNELIVRDRDIGRLEVLAHNFNEDGVPVWQLD
KLDIANPSATLTATANWRTSAELANSADDTTSRRTVFDFKLDIKDAGGLLQRFGQPRTLK
AGSGTLSGKMVWRGGPTAIDYPTLNGNMAVDLRHGQILKVDPGVAKLLGVLSLQSLARFA
TLNFRDVIGEGLPFEHVTGTAQIHNGIGHTDNFEMVTAPARAEMKGSVDLAQETQDLHVQ
IVPTVSAGAAVVAAAVINPLLGLGALVADLAFSQSISHAFAREYAITGSWSKPHIERVKN
DRGKMDAPASTAVAQ