Protein Info for H281DRAFT_04647 in Paraburkholderia bryophila 376MFSha3.1

Annotation: D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 184 TIGR01662: HAD hydrolase, family IIIA" amino acids 5 to 146 (142 residues), 121.3 bits, see alignment E=3.2e-39 TIGR01656: histidinol-phosphate phosphatase domain" amino acids 6 to 144 (139 residues), 153.7 bits, see alignment E=3.3e-49 PF08645: PNK3P" amino acids 9 to 131 (123 residues), 41.2 bits, see alignment E=3e-14 PF00702: Hydrolase" amino acids 14 to 141 (128 residues), 46.4 bits, see alignment E=1.2e-15 PF13419: HAD_2" amino acids 96 to 144 (49 residues), 25.1 bits, see alignment E=3.5e-09 PF13242: Hydrolase_like" amino acids 102 to 172 (71 residues), 47.7 bits, see alignment E=2.4e-16

Best Hits

Swiss-Prot: 60% identical to GMHBB_BORBR: D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase (BB4091) from Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)

KEGG orthology group: K03273, D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC: 3.1.3.-] (inferred from 97% identity to bug:BC1001_0396)

Predicted SEED Role

"D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-); Histidinol-phosphatase (EC 3.1.3.15)" (EC 3.1.1.-, EC 3.1.3.15)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.1.-, 3.1.3.-

Use Curated BLAST to search for 3.1.1.- or 3.1.3.- or 3.1.3.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M876 at UniProt or InterPro

Protein Sequence (184 amino acids)

>H281DRAFT_04647 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase (Paraburkholderia bryophila 376MFSha3.1)
MPTKKVVILDRDGVINADSDAFIKSPDEWVALPGSLEAIARLSQAGYRVAIATNQSGIGR
GLFDMNALNAMHLKMHRMAASVGGRIDAVFFCPHTAEDHCECRKPKPGMLKMINERFEVD
PENTPVVGDAMRDLQAGAALGHPVHLVLTGKGRKTLTAGGLPDGTVVHDDLRAFVLDFLA
DAQE