Protein Info for H281DRAFT_04538 in Paraburkholderia bryophila 376MFSha3.1

Annotation: hemoglobin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 137 PF01152: Bac_globin" amino acids 14 to 134 (121 residues), 154.4 bits, see alignment E=7.3e-50

Best Hits

KEGG orthology group: K06886, hemoglobin (inferred from 94% identity to bpy:Bphyt_1316)

Predicted SEED Role

"Hemoglobin-like protein HbO" in subsystem Bacterial hemoglobins

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MC84 at UniProt or InterPro

Protein Sequence (137 amino acids)

>H281DRAFT_04538 hemoglobin (Paraburkholderia bryophila 376MFSha3.1)
MSELDDEVSAAQPTAFELVGGEARVRELVDRFYDLMDLEAEFAGIRALHPESMDGSRDKL
FWFLCGWLGGPDHYISRFGHPRLRARHLPFAIASSERDQWLRCMAWAMEDIGLAEPLRER
LLGSFFETADWMRNRNG