Protein Info for H281DRAFT_04537 in Paraburkholderia bryophila 376MFSha3.1

Annotation: putative ABC transport system permease protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 881 transmembrane" amino acids 63 to 84 (22 residues), see Phobius details amino acids 305 to 326 (22 residues), see Phobius details amino acids 353 to 380 (28 residues), see Phobius details amino acids 400 to 422 (23 residues), see Phobius details amino acids 442 to 462 (21 residues), see Phobius details amino acids 468 to 490 (23 residues), see Phobius details amino acids 521 to 540 (20 residues), see Phobius details amino acids 756 to 777 (22 residues), see Phobius details amino acids 809 to 832 (24 residues), see Phobius details amino acids 845 to 866 (22 residues), see Phobius details PF02687: FtsX" amino acids 309 to 427 (119 residues), 41 bits, see alignment E=1.8e-14 amino acids 760 to 873 (114 residues), 51.6 bits, see alignment E=9.5e-18

Best Hits

KEGG orthology group: K02004, (no description) (inferred from 93% identity to bgf:BC1003_2349)

Predicted SEED Role

"ABC transporter, permease protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MI23 at UniProt or InterPro

Protein Sequence (881 amino acids)

>H281DRAFT_04537 putative ABC transport system permease protein (Paraburkholderia bryophila 376MFSha3.1)
LSDTSETRDTSETRDTSGTDEASDKVTHSTARVGVSATRRFSGGDLLRQAIRMTARDWRA
GELTMLLLALVLAVAALSSVGFLADRLHQGLERDARRMIAADFIVRADHPVDPQFAQQAS
ALGLSTATTAIFPSMINSTGSQPVSRLAAIKAVSPGYPLRGALRIASAPTAADHPAQTIP
APGTVWVDQQLLDALKVRIGDTVKVGNRSFIIGAMITRELDRGFSFVNFSPRLMMRADEV
QSTGLITFGSRVTYRLLVAGADASVARFAEFAHGKVDGGKMRGVALESLQDGQPQVRQTL
DRASHFLTLVSLLTALLAAVAIAMAAHRYMRRHLDGCAAMRCLGVSQRTLRALFTLEFVG
VGVLGGALGVALGYLGHLALLTWLGSLIDVALPYPTAWPALEGIAAGLVLLLGFALPPLL
PLTRVPPVRVLRREWGEEGRTAWAAYALGIVLFAGLLIVAAGELKLGGIVAGGFAGGLLV
FACVARVALWGAARVVRSERVNAGIGWRYALASLERRSSASALQITALGIGLMCLLLIAM
TRNDLVAGWRKSTPPDAPNEFIIDIQPDQRDAVTHYLDTHGVPDTVLSPMVRGRLTAING
KAVNPDSFKGDDAKRLVDREFNLSYTTQLPEDNRLSAGTWYGDAKTPQISIEEGLAKLIN
VKPGDVLRFDVTGLQIDAPVTSVRKLDWGSFKVNFFVLMPPAALQDFPATFITSFHLPPE
KRSTIDGLIAAYPNLTAIDTGPILAQVQRVLQQVIGAVQFLFAFTLAAGVLVLYAALAGT
RDERMRESALLRALGASHGQVRTVQIAEFVAVGALAGFMAALGAQVIGWVLATRVFQFYL
EFNPWLLPAGIAAGVACAAVGGWLSLRHVLSRPALQSLRDA