Protein Info for H281DRAFT_04461 in Paraburkholderia bryophila 376MFSha3.1

Annotation: monosaccharide ABC transporter membrane protein, CUT2 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 390 transmembrane" amino acids 50 to 72 (23 residues), see Phobius details amino acids 81 to 101 (21 residues), see Phobius details amino acids 108 to 127 (20 residues), see Phobius details amino acids 132 to 153 (22 residues), see Phobius details amino acids 160 to 182 (23 residues), see Phobius details amino acids 202 to 222 (21 residues), see Phobius details amino acids 238 to 255 (18 residues), see Phobius details amino acids 284 to 306 (23 residues), see Phobius details amino acids 321 to 352 (32 residues), see Phobius details amino acids 364 to 383 (20 residues), see Phobius details PF02653: BPD_transp_2" amino acids 79 to 377 (299 residues), 145.2 bits, see alignment E=1.1e-46

Best Hits

KEGG orthology group: K02057, simple sugar transport system permease protein (inferred from 97% identity to bgf:BC1003_2422)

Predicted SEED Role

"Inositol transport system permease protein" in subsystem Inositol catabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MEW5 at UniProt or InterPro

Protein Sequence (390 amino acids)

>H281DRAFT_04461 monosaccharide ABC transporter membrane protein, CUT2 family (Paraburkholderia bryophila 376MFSha3.1)
MGVAGKHFPPHVDSNSAASHSAASRPETDGRDERVRKESWFGHLLNRPEFAAISGAVLVF
LVFALTAGGSGMFNLDGVMNWSQVSAYLGILSVGACLLMIAGEFDLSIGSMIGFAGMMVA
IPTVYFHWPISLAILFAFVGSMLLGALNGYLVMRTRLPSFIVTLAFLFILRGLTLALSIM
FADRTIVSGVGDLAQQDWLANTLFHGVALQGLFTMLAHHGIGTLLDNGHALVPGIPKVIL
WWFGLAAICAFVLAKTRAGNWILAVGGDANAAKNVGIPVRRVKILLFVLTAFCSCLFAVL
QVCDIGSAAADRGLQKEFEAIIAAVIGGTLLTGGYGSVIGACFGALIFGVVQIGITYTNV
SSDWFRVFLGVMLLIAVLFNHYVRRRVAQS