Protein Info for H281DRAFT_04412 in Paraburkholderia bryophila 376MFSha3.1

Annotation: phosphate ABC transporter membrane protein 1, PhoT family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 transmembrane" amino acids 76 to 100 (25 residues), see Phobius details amino acids 128 to 154 (27 residues), see Phobius details amino acids 166 to 194 (29 residues), see Phobius details amino acids 214 to 239 (26 residues), see Phobius details amino acids 280 to 303 (24 residues), see Phobius details amino acids 343 to 363 (21 residues), see Phobius details TIGR02138: phosphate ABC transporter, permease protein PstC" amino acids 72 to 365 (294 residues), 298.1 bits, see alignment E=3e-93 PF00528: BPD_transp_1" amino acids 150 to 361 (212 residues), 50.3 bits, see alignment E=1.3e-17

Best Hits

Swiss-Prot: 75% identical to PSTC_ECO57: Phosphate transport system permease protein PstC (pstC) from Escherichia coli O157:H7

KEGG orthology group: K02037, phosphate transport system permease protein (inferred from 98% identity to bug:BC1001_2497)

MetaCyc: 75% identical to phosphate ABC transporter membrane subunit PstC (Escherichia coli K-12 substr. MG1655)
ABC-27-RXN [EC: 7.3.2.1]; 7.3.2.1 [EC: 7.3.2.1]

Predicted SEED Role

"Phosphate transport system permease protein PstC (TC 3.A.1.7.1)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism (TC 3.A.1.7.1)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.3.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MDY9 at UniProt or InterPro

Protein Sequence (373 amino acids)

>H281DRAFT_04412 phosphate ABC transporter membrane protein 1, PhoT family (Paraburkholderia bryophila 376MFSha3.1)
MALTARPGDVPAPGNISRYSRITGRAAYVARQLEKVHQALMSDIQLASGASRATPPGSAS
QQKAPSRAGDVIFGGLARLAAIVTLLLLGGIIVSLIVASMPSIKQFGLGFLWSAQWDPPS
KQFGALVPIYGTIATSIIALIIAVPVSFGIALFLTELSPAWLRRPLGIAIELLAAIPSIV
YGMWGLLVFAPIFATWFEKPLGAVLGGIPVVGALFQGAPIGIGILCAGVILAIMIIPYIA
SVMRDVFEVTPVLLKESAYGIGCTTWEVMWKIVLPFTKSGVIGGVMLGLGRALGETMAVT
FVIGNTNLLDNVSLFSPGNSITSALANEFAEADPGLHTSALMELGLILFVITFIVLAISK
IMLLRLEKGEGAK