Protein Info for H281DRAFT_04198 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Protein of unknown function (DUF2946)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 190 PF11161: DUF2944" amino acids 1 to 187 (187 residues), 232 bits, see alignment E=2.6e-73

Best Hits

KEGG orthology group: None (inferred from 80% identity to bug:BC1001_2933)

Predicted SEED Role

"FIG00452863: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (190 amino acids)

>H281DRAFT_04198 Protein of unknown function (DUF2946) (Paraburkholderia bryophila 376MFSha3.1)
MDDIVKQALAKWPNVPSCTGWLMLDRRGNWRMRDDAAQASGSSGVPIRHEALLGFINRNY
ERDERGQWFFQNGPQRVYVELGYTPWVVRLIVEPDGTLALKDQAGNDFEPSAVLADDEGS
ILFADTSAQPRVAVLHDHDLEVFADHAVLAEESLSGEFHWNGGVKLSLEPVRRADVASRF
DFVQSPATNA