Protein Info for H281DRAFT_04065 in Paraburkholderia bryophila 376MFSha3.1

Annotation: FKBP-type peptidyl-prolyl cis-trans isomerase SlpA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 PF00254: FKBP_C" amino acids 45 to 116 (72 residues), 37.2 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: K03774, FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC: 5.2.1.8] (inferred from 96% identity to bgf:BC1003_2731)

Predicted SEED Role

"FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8)" (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MFN1 at UniProt or InterPro

Protein Sequence (188 amino acids)

>H281DRAFT_04065 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (Paraburkholderia bryophila 376MFSha3.1)
MWLTIDALRTARRRFAARVSCAPRRTRESALRLSEHCMSIIDISEVKAGSHVTLHYRLSL
ADGAEVINTFNDKPATLLLGAGQLAPPLEDILMGLKVGHHSTFQLAPGAAFGPRNPELIQ
RVSLATLRENSMIGEDFSPGDLVEFNAPGGGRYAGVLKEVNETSALFDFNHPLAGQALAF
EVKIIGIL