Protein Info for H281DRAFT_04037 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Undecaprenyl-diphosphatase (EC 3.6.1.27)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 283 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details transmembrane" amino acids 44 to 63 (20 residues), see Phobius details amino acids 83 to 101 (19 residues), see Phobius details amino acids 107 to 129 (23 residues), see Phobius details amino acids 194 to 214 (21 residues), see Phobius details amino acids 226 to 248 (23 residues), see Phobius details amino acids 260 to 281 (22 residues), see Phobius details TIGR00753: undecaprenyl-diphosphatase UppP" amino acids 9 to 266 (258 residues), 254.9 bits, see alignment E=4.7e-80 PF02673: BacA" amino acids 9 to 269 (261 residues), 297 bits, see alignment E=7.4e-93

Best Hits

Swiss-Prot: 90% identical to UPPP1_PARXL: Undecaprenyl-diphosphatase 1 (uppP1) from Paraburkholderia xenovorans (strain LB400)

KEGG orthology group: K06153, undecaprenyl-diphosphatase [EC: 3.6.1.27] (inferred from 90% identity to bgf:BC1003_2705)

Predicted SEED Role

"Undecaprenyl-diphosphatase (EC 3.6.1.27)" (EC 3.6.1.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.6.1.27

Use Curated BLAST to search for 3.6.1.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MEI5 at UniProt or InterPro

Protein Sequence (283 amino acids)

>H281DRAFT_04037 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Paraburkholderia bryophila 376MFSha3.1)
MDWLLACKALILGVVEGLTEFLPVSSTGHLIVAGSLLNFTDEHAKTFDVVIQLGAILAVC
WEFRRRIGSVVTGLPSRPEARRFTLNVIIATIPAVVLGLLLEKSIKAALFSPVPVAFALV
VGGVVILWAEARQRAQAREGGQARVARVTSVDDLSAMDALKVGLAQCFALIPGTSRSGST
IIGGMLFGLDRRVATEFSFFLAIPIMFGATAYELYKDWHLLSVDALGVFALGFVAAFVSA
FLCVRWLLRYIAGHDFTAFAWYRIGFGLLILLVGYSGALSWTE