Protein Info for H281DRAFT_03966 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Dehydrogenase (flavoprotein)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 437 PF01494: FAD_binding_3" amino acids 30 to 282 (253 residues), 74.9 bits, see alignment E=2.9e-24 PF04820: Trp_halogenase" amino acids 31 to 104 (74 residues), 34.8 bits, see alignment E=3.6e-12 amino acids 119 to 384 (266 residues), 48.6 bits, see alignment E=2.4e-16 PF00890: FAD_binding_2" amino acids 31 to 62 (32 residues), 21.4 bits, see alignment (E = 5.3e-08) PF12831: FAD_oxidored" amino acids 31 to 196 (166 residues), 43.8 bits, see alignment E=9.3e-15 PF13450: NAD_binding_8" amino acids 34 to 63 (30 residues), 32.2 bits, see alignment (E = 4.3e-11)

Best Hits

KEGG orthology group: None (inferred from 92% identity to bgf:BC1003_2643)

Predicted SEED Role

"FIG022199: FAD-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MI58 at UniProt or InterPro

Protein Sequence (437 amino acids)

>H281DRAFT_03966 Dehydrogenase (flavoprotein) (Paraburkholderia bryophila 376MFSha3.1)
MQRIAASGKQTIEANLSTHDMKHTAEHTTVDVAIIGAGPAGAVAAALLRKAGRSVLVLER
QHFPRFSIGESLLPQSMAYLEEAGMLQAVIEAGFQYKNGAQFVYRGQSSSFDFRDKHTAG
WGTTYQVERAVFDEILIRCAAEQGADVRFGHTVQAVHTGEGTGAAPRVDVIDEAGHAYQV
EARFIFDASGFGRVLPRLLNLEAPTRMPTRAALFSHVYDGLPAGAHDRNKICVATHPERR
DVWFWMIPLAGGRSSVGCVAESSFLDVPPTEREPKLRALIQKEPTFNRLIGDAPFLLPVR
HIGGYSANVERLHGPGYALLGNAGEFLDPVFSSGVTIALRSAHLAVQTLNRQLDGEQVDW
SANYDVSLRKGIDTFRAFVERWYTGELQDIIFYPDQTPSIRRMISAVLAGYAWDESNPYV
ADPVRRLNALHEVCTQR