Protein Info for H281DRAFT_03499 in Paraburkholderia bryophila 376MFSha3.1

Annotation: 2-aminoethylphosphonate transport system substrate-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 362 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details TIGR03227: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein" amino acids 8 to 362 (355 residues), 572.8 bits, see alignment E=1.2e-176 PF13531: SBP_bac_11" amino acids 40 to 292 (253 residues), 68.7 bits, see alignment E=1.4e-22 PF01547: SBP_bac_1" amino acids 49 to 292 (244 residues), 56.8 bits, see alignment E=7.9e-19 PF13416: SBP_bac_8" amino acids 57 to 308 (252 residues), 72.8 bits, see alignment E=8.2e-24 PF13343: SBP_bac_6" amino acids 87 to 332 (246 residues), 80.3 bits, see alignment E=3.3e-26

Best Hits

KEGG orthology group: K11081, 2-aminoethylphosphonate transport system substrate-binding protein (inferred from 95% identity to bug:BC1001_5534)

Predicted SEED Role

"ABC transporter, periplasmic ligand binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MHC7 at UniProt or InterPro

Protein Sequence (362 amino acids)

>H281DRAFT_03499 2-aminoethylphosphonate transport system substrate-binding protein (Paraburkholderia bryophila 376MFSha3.1)
MTKTNSLQTTGLARKLLPALVAAAMFGGVAMQAQAADAVVLYTADGLENLYKDVLPAFEK
KEGVKVNIVTAGSGEVVNRATIEKDQPKADVIVTLPPFIQQADQSGLLQAYQSANYKNVP
AIAKAPNGSWATFVNNYFSFAINPEVTKNQPKTFADLLHPDYSGKVAYSNPATAGDGMAV
IILTSSLMGEDKAFDYLKKLEQSAKFHTKGTGYLDVLLSRNEIAFANGDLQMDLDDAANG
GLSLKPVFLAAAPGEQPTTFQLPYAIGLIKNGPNQAQGKKLIDYLMSTEVQAKVPDIFGI
PGRTDVPLAGKNGETVKQAIAGVKLIPVDWNHVMAKKADWTARWKSDVIGSSGKQIEVVK
PK