Protein Info for H281DRAFT_03375 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Dimerisation domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 353 PF16864: Dimerisation2" amino acids 27 to 104 (78 residues), 64.7 bits, see alignment E=6.2e-22 PF00891: Methyltransf_2" amino acids 126 to 334 (209 residues), 120.5 bits, see alignment E=6.5e-39

Best Hits

Swiss-Prot: 47% identical to TCMO_STRGA: Tetracenomycin polyketide synthesis 8-O-methyl transferase TcmO (tcmO) from Streptomyces glaucescens

KEGG orthology group: None (inferred from 81% identity to bge:BC1002_1107)

MetaCyc: 47% identical to tetracenomycin B3 8-O-methyl transferase (Streptomyces glaucescens)
2.1.1.-

Predicted SEED Role

"O-methyltransferase, family 2"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (353 amino acids)

>H281DRAFT_03375 Dimerisation domain-containing protein (Paraburkholderia bryophila 376MFSha3.1)
MESTSSMVRQEPGANNPRQQEPSPERLLQLGMGFWASKTLLSAVELGVFSCLATGPRDAA
ELSEALGLHPRSALDFLDALVALNLLEREDGKYRNTPDAGLFLDMAKPSYVGGLLEMANA
RLYPFWGSLTEALRTGLPQNEAKGGGNPFDAMYSDEQKLRCFLRAMSGVSLGAAKAIAQQ
FPWQNYKSFIDIGAAQGALPVQVALAHPHLRGGGFDLPIVGPVFEEYVASHGLQERLNFY
PGDFFRDSCPAADVLVMGHILHDWDLGQKLELLAKCYASLPPGGCLIVYDAVIDDDRRRN
AFGLLMSLNMLIETPGGFDYTGAQCREWMQQVGFTQVRVEPLAGPDSMVIGTK