Protein Info for H281DRAFT_03320 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 142 PF04828: GFA" amino acids 38 to 122 (85 residues), 61.6 bits, see alignment E=3.8e-21

Best Hits

KEGG orthology group: None (inferred from 80% identity to bug:BC1001_5398)

Predicted SEED Role

"Gfa-like protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (142 amino acids)

>H281DRAFT_03320 Uncharacterized conserved protein (Paraburkholderia bryophila 376MFSha3.1)
MHTEDAPRSAAGKTAQTGGCACGAVRFEVSAAPRRVSLCHCMTCRRVHGSAFGAYAMFAR
DAVQLSGPVQMWQSSAEGRRYFCQTCGSVAFMEYVDSDELDIPLGAFDSVGLYEPSYELW
CCHKEPWLPQGVRTEYEEESPH