Protein Info for H281DRAFT_03205 in Paraburkholderia bryophila 376MFSha3.1

Annotation: putative oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 143 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 46 to 67 (22 residues), see Phobius details amino acids 74 to 93 (20 residues), see Phobius details amino acids 108 to 130 (23 residues), see Phobius details PF07291: MauE" amino acids 9 to 87 (79 residues), 30.6 bits, see alignment E=5.8e-11 PF07681: DoxX" amino acids 10 to 90 (81 residues), 64.8 bits, see alignment E=1.4e-21 PF02077: SURF4" amino acids 35 to 133 (99 residues), 43.6 bits, see alignment E=4.4e-15

Best Hits

Swiss-Prot: 45% identical to YPHA_ECOLI: Inner membrane protein YphA (yphA) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 97% identity to bpy:Bphyt_4554)

Predicted SEED Role

"putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MG62 at UniProt or InterPro

Protein Sequence (143 amino acids)

>H281DRAFT_03205 putative oxidoreductase (Paraburkholderia bryophila 376MFSha3.1)
MTRPVDSGVILIARIALAVLFLWGGVMKLLGYAGFVGYLHSKGVPFVQIAAPIATAVEAV
GGLLLIVGFKVRPLALIMAVYTVATAVLGHDFWNVTDAALQRDMVIHFWKNIGIAGGFLL
LFVTGAGRISIDGARAPRSGLGL