Protein Info for H281DRAFT_02974 in Paraburkholderia bryophila 376MFSha3.1

Annotation: anaerobic ribonucleoside-triphosphate reductase activating protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 214 PF13353: Fer4_12" amino acids 16 to 145 (130 residues), 88.3 bits, see alignment E=3e-29

Best Hits

KEGG orthology group: None (inferred from 67% identity to bam:Bamb_5699)

Predicted SEED Role

"Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)" in subsystem Ribonucleotide reduction (EC 1.97.1.4)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.97.1.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (214 amino acids)

>H281DRAFT_02974 anaerobic ribonucleoside-triphosphate reductase activating protein (Paraburkholderia bryophila 376MFSha3.1)
MKLRLSRVHFPVTTLGPGKRIGIWFQGCSIHCPGCISADTWSTGHGHTTLAALLERLADY
LPHADGITISGGEPFEQPDPLVALLVALRSATNGDILVYSGHPIESLTQTLAKASGLIDA
LITDPFELHSAHSRPLRGSDNQRMHLLTALGRERFAQYERTLTEQDKSLDVMFDEDGSVW
FAGIPSRGDFQRLRDLLNDEGHVVHISADKARSR