Protein Info for H281DRAFT_02954 in Paraburkholderia bryophila 376MFSha3.1

Annotation: glyoxylase I family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 137 PF00903: Glyoxalase" amino acids 4 to 124 (121 residues), 79.1 bits, see alignment E=3.8e-26 PF13669: Glyoxalase_4" amino acids 6 to 113 (108 residues), 39.4 bits, see alignment E=7e-14

Best Hits

Swiss-Prot: 59% identical to YAER_ECOLI: Uncharacterized protein YaeR (yaeR) from Escherichia coli (strain K12)

KEGG orthology group: K08234, glyoxylase I family protein (inferred from 79% identity to avn:Avin_04140)

Predicted SEED Role

"FIG01280259: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (137 amino acids)

>H281DRAFT_02954 glyoxylase I family protein (Paraburkholderia bryophila 376MFSha3.1)
MLLRIHHAAIICSNYEVSRRFYTEILGLQIVAEHYREHRQSYKLDLMLPDGSQVELFSFP
DAPLRPSYPEACGLRHLAFGVSDVDVCKALLESKGVLVEDVRVDEYTNRRFVFFADPDGL
PLELYEVGAGLSHKQSV