Protein Info for H281DRAFT_02884 in Paraburkholderia bryophila 376MFSha3.1

Annotation: peptide-methionine (S)-S-oxide reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 247 signal peptide" amino acids 1 to 43 (43 residues), see Phobius details TIGR00401: peptide-methionine (S)-S-oxide reductase" amino acids 63 to 213 (151 residues), 171.5 bits, see alignment E=8.2e-55 PF01625: PMSR" amino acids 64 to 216 (153 residues), 193.2 bits, see alignment E=1.6e-61

Best Hits

KEGG orthology group: K07304, peptide-methionine (S)-S-oxide reductase [EC: 1.8.4.11] (inferred from 86% identity to bpy:Bphyt_5394)

Predicted SEED Role

"Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)" (EC 1.8.4.11)

Isozymes

Compare fitness of predicted isozymes for: 1.8.4.11

Use Curated BLAST to search for 1.8.4.11

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MJN7 at UniProt or InterPro

Protein Sequence (247 amino acids)

>H281DRAFT_02884 peptide-methionine (S)-S-oxide reductase (Paraburkholderia bryophila 376MFSha3.1)
MNMDKHIDRKSVRSRAARLSLSVGFGALALLLAQRMAFSSEGAVAIAPPALDEPVAAATA
HEETAVFAGGCFWGVQGVFQHVRGVKQAVSGYSGGQRDTANYETVSGGATGHAESVQVTF
DPTQVTYGQLLQVYFSVIHDPTQLDRQGPDSGTQYRSAVFPLNDMQRRVAQGYIAQLQKA
HAFAAPIVTKAEPFKGFYPAEFYHQNYLTQHPNSGYIALYDMPKVANLKRMFPNLYRDTP
VLVQAAQ