Protein Info for H281DRAFT_02777 in Paraburkholderia bryophila 376MFSha3.1

Annotation: alpha-glucosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 524 PF00128: Alpha-amylase" amino acids 29 to 367 (339 residues), 341.9 bits, see alignment E=5.4e-106 PF11941: DUF3459" amino acids 434 to 517 (84 residues), 32.1 bits, see alignment E=1.3e-11

Best Hits

KEGG orthology group: K01187, alpha-glucosidase [EC: 3.2.1.20] (inferred from 88% identity to bgf:BC1003_3666)

Predicted SEED Role

"Maltodextrin glucosidase (EC 3.2.1.20)" in subsystem Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (524 amino acids)

>H281DRAFT_02777 alpha-glucosidase (Paraburkholderia bryophila 376MFSha3.1)
MSELAWWQRGVIYQVYPRSFQDSNGDGIGDLAGITSRLPYLAGLGIDAVWLSPIYPSPMA
DFGYDVADYCDIDPMFGTLGDFKQFADRAHELGLKVLLDFVPNHSSDRHPWFEESRSSRE
NPKRDWYLWRDPAPDGGPPNNWLSRMGGSAWEWDERTGQYYYHAFLREQPDLNWRNPQVR
RAMDDVLRFWLDRGVDGFRVDVLWLLIKDSQFRDNPPNPAYEPGQPEHHRQLQTYTEDQP
EVHEIVRSMRATLDEYGERVLIGEIYLPVPQLVRYYGANGDGADMPFNFQLLNAAWNAGE
IARMIRDYDSALPVHAWPNWVLGNHDNPRVASRVGAAQARVAAVLLLTLRGTPTLYYGDE
IGMTDGEISPDRVQDPAEIRQPDIGQGRDPERTPMQWDAALPGAGFTNGRSWLPISTDTS
VRAQDGDPSSMLSLYRRLLELRRSNAALVQGAIENVAASGDVLTFERHYRGQRLFIALNM
GAADAVMQPRSGVVLLSTLAGREGQALPGSGYRLAGSEAIIAAI