Protein Info for H281DRAFT_02726 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 482 PF01546: Peptidase_M20" amino acids 91 to 450 (360 residues), 73 bits, see alignment E=3.3e-24 PF07687: M20_dimer" amino acids 203 to 354 (152 residues), 24.6 bits, see alignment E=2e-09

Best Hits

KEGG orthology group: None (inferred from 80% identity to bph:Bphy_1159)

Predicted SEED Role

"Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (482 amino acids)

>H281DRAFT_02726 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase (Paraburkholderia bryophila 376MFSha3.1)
LTRHTAIELATEGYRSGQFLADLQRRVALRTESQEPERDSLLRAYLTDELTPRLEAWGFV
CRIAENPHEGAGPFLIAHRHEGDDLPTVLSYGHGDVVRGYDAQWADGRSPWEVSVDGERW
YGRGTADNKGQHSINLAALKAVMDARGGKLGFNLKLLFETGEEVGSPGLHALCTSLRAEL
AADVLIASDGPRLAASRPTLFLGSRGVTNFRLDVNLRDGAHHSGNWGGLLRNPGIVLANA
IASMVDANGRIGIEGLRPPPVPDAVRRALAGITVGGNPGEPEVDTDYGEPGLTPAERVFG
WNNLEVLAFRTGNPEKPVNAIPPFAFAHMQLRFVVGTAWSDIAGIVRRHLDAHGFQMVEV
SVERGAPATRVDPENPWVRWALRSLTQTTGAQPVLLPNLGGTLPNDVFADVLGMPTLWVP
HSYPGCSQHAPDEHLLAPVVEEGLRIMAGLFWDLGTREGDAPDANPAANLPRQPYRGQRN
EY