Protein Info for H281DRAFT_02642 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyl hydrolase family 63 C-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 911 PF03200: Glyco_hydro_63" amino acids 555 to 786 (232 residues), 22.6 bits, see alignment E=2.2e-09

Best Hits

KEGG orthology group: None (inferred from 83% identity to bge:BC1002_6103)

Predicted SEED Role

"Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (911 amino acids)

>H281DRAFT_02642 Glycosyl hydrolase family 63 C-terminal domain-containing protein (Paraburkholderia bryophila 376MFSha3.1)
MADAIVDVTEQKRLNEQREAQVPWKKWGPYLSERQWGTVREDYSDDGNAWDYFSHDQARS
RTYRWGEDGLGGLCDDQQRLCFALALWNGHDPILKERLFGLTNSEGNHGEDVKEYYFYID
STPTHSYMKYLYKYPQKEYPYRDLVETNRNRSRAEMEYELLDTGIFDEDRYFDVFVEYAK
ADPEDILVRISVHNRGPDAAQIRILPTLWFRNTWSWGGDDRKPSLTEAGSGIIRATHHEL
GQYWLYCDGDCEALFTDNESNAQRLWGVANSSPYVKDAFHDYVVSRADAVNPAKSGTKAA
AHYAVEVPAGGSKTFRLRLRAAQMENAFDGFEKVFDSRIAEADEFYERIAPKTLTEDQRR
VHRQALAGMLWSKQYYYFDLEKWLREHKSHPLLDSARRDVRNTDWFHMLNADVISMPDKW
EYPWYAAWDLAFHTVSLALVDFDFAKEQLLLMLRNLYFHPSGQIPAYEWNFSDVNPPVHA
AATLWLYKYEKQLGRADPRFLERSFQALMLNFNWWVNRKDPSGRNVFAGGFLGLDNIGVF
DRSAQLPTGGTLEQADGTAWMAFYCQCMLEMATLLTEYDPLYEEVAFKFVQHFMWISYAM
DRRGVHHDEMWDEEDGFFYDLLRLPDGQATRLKVRSMVGLLPLCASTVFEGDAVHRYPKL
MELIAQFRERHPELIAQVAPTEAGFIGYKQRRLLAILNRKKLERVLGYLLDENEFLGPHG
IRSLSRYHQDHPFVFRTGGIDYTVQYLPAESNTGMFGGNSNWRGPVWMPVNLLIVRALIN
LYSFYGDEFKVECPTGSGQQMSLFEVAEEIVRRLSGTFLRGEDGRRPVYGGTEKFQSDPH
WRDLILFYEYFHGDNGAGLGASHQTGWTGLIAPLLDIFGRIDAKSLLETERAYLMAKVVK
EQVVGVGQDQR