Protein Info for H281DRAFT_02600 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Undecaprenyl-diphosphatase (EC 3.6.1.27)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 transmembrane" amino acids 28 to 50 (23 residues), see Phobius details amino acids 59 to 81 (23 residues), see Phobius details amino acids 102 to 121 (20 residues), see Phobius details amino acids 128 to 146 (19 residues), see Phobius details amino acids 152 to 170 (19 residues), see Phobius details PF01569: PAP2" amino acids 59 to 169 (111 residues), 47.9 bits, see alignment E=6.1e-17

Best Hits

KEGG orthology group: None (inferred from 89% identity to bug:BC1001_0830)

Predicted SEED Role

"phosphoesterase, PA-phosphatase related"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (200 amino acids)

>H281DRAFT_02600 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Paraburkholderia bryophila 376MFSha3.1)
MNALEALNRALFLSINATPSAPVWLIDIARFIADDVIYLVPLLLVALWLAGGEDRRAAAV
RVCCAVLAALGINQLIGLGWMHPRPFMIGLGHTFIEHAPDSSFPSDHVTVLASGALTLLL
AGERRYGLSMLLAGLAVAWARVFVGVHFPLDMAGAVAVACVAYALVAPLWRMSGASLTRG
LIAVYRKLLAWPIGRGWLSS