Protein Info for H281DRAFT_02577 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Sugar phosphate isomerase/epimerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 271 PF01261: AP_endonuc_2" amino acids 20 to 231 (212 residues), 65 bits, see alignment E=4.4e-22

Best Hits

KEGG orthology group: None (inferred from 46% identity to msm:MSMEG_6715)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (271 amino acids)

>H281DRAFT_02577 Sugar phosphate isomerase/epimerase (Paraburkholderia bryophila 376MFSha3.1)
MHELSLHHLTILDAHPLQLVDAAAAAGFEYCGLRLVAPTAADTIVDVANNPALIRELRAR
LDATGVRLLDIEAIWLSPQTDVESLLPALEAGHMLGAQHVLCVGNDTERGRLRENFGRLC
EAADGFGLSVGLEAITYCAVGTPAEALEVVQASGQANARILIDALQFFRSGATCERIGAI
DPALIEYIQICDGPSAAPQSLEARRQEARTSRLLPGDGELPLRELLSKLRSDLPLAVEAP
TLALRGLPFNEQARRIHARMQTFLAGPVSWC