Protein Info for H281DRAFT_02489 in Paraburkholderia bryophila 376MFSha3.1

Annotation: NitT/TauT family transport system substrate-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 326 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details PF13379: NMT1_2" amino acids 45 to 245 (201 residues), 35.2 bits, see alignment E=1.9e-12 PF09084: NMT1" amino acids 46 to 250 (205 residues), 89.5 bits, see alignment E=4.6e-29 PF12974: Phosphonate-bd" amino acids 58 to 257 (200 residues), 40.5 bits, see alignment E=3.4e-14

Best Hits

KEGG orthology group: K02051, sulfonate/nitrate/taurine transport system substrate-binding protein (inferred from 95% identity to bgf:BC1003_5969)

Predicted SEED Role

"putative ABC transporter, periplasmic protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MHF3 at UniProt or InterPro

Protein Sequence (326 amino acids)

>H281DRAFT_02489 NitT/TauT family transport system substrate-binding protein (Paraburkholderia bryophila 376MFSha3.1)
MAFTARKALVALTTALALSVAVVSTPALADGKKVTISQAFQSMLYLPLYVAIDGGFFEKA
GLDVNKQTAGSPSAALSAVLSGSADFSLHGPEWTAVAAEKGADVDVIANVVNGAAVWIAV
APDVKFSGIKDVKDQVVVSGQMPTTSTSLFFKLLKENGMSQSDVKLVQVPLGSEIGPLVA
GQAKIAVMYEPGLDQAVAKGMKVVLGFPKLYGEYAFSSISAKRSVDPDAAARFVKGLQNA
LLYMQSHPAETAAIARKEFPTLDAAVVDAAVKRMLDEGVYPKNVSITPKALTVAMDTQIA
LGNLKQQPNYDRFIVQNYIQPALAAK