Protein Info for H281DRAFT_02434 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 824 PF13432: TPR_16" amino acids 31 to 90 (60 residues), 30.9 bits, see alignment 1.8e-10 amino acids 240 to 295 (56 residues), 16.6 bits, see alignment 5.1e-06 amino acids 279 to 329 (51 residues), 26 bits, see alignment 6.2e-09 amino acids 303 to 362 (60 residues), 20.3 bits, see alignment 3.8e-07 PF14559: TPR_19" amino acids 36 to 94 (59 residues), 27.1 bits, see alignment 2.4e-09 amino acids 240 to 302 (63 residues), 26.5 bits, see alignment 3.6e-09 PF13181: TPR_8" amino acids 302 to 327 (26 residues), 12 bits, see alignment (E = 0.00011) PF13844: Glyco_transf_41" amino acids 369 to 562 (194 residues), 92.8 bits, see alignment E=9.1e-30 amino acids 582 to 749 (168 residues), 77.5 bits, see alignment E=3.9e-25

Best Hits

KEGG orthology group: None (inferred from 89% identity to bgf:BC1003_3392)

Predicted SEED Role

"Predicted O-linked N-acetylglucosamine transferase, SPINDLY family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (824 amino acids)

>H281DRAFT_02434 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family (Paraburkholderia bryophila 376MFSha3.1)
MSIQFEFSAPQPLSPEQQRAQDIALVMQSAIEQYHAGEVDDARALFEAIVEAVPNHPDAN
YNLGVIKVQTDRAAEAVAHFEVALGVRPSNGQYWVAYINALFQSDQTAAGWLAVEMAQQQ
GVNGPALNGLITQLAYPDRKLETVPNARPTTANNITLIVGETAAEAQQQEPAPQEEQREA
APVSIKTTKHRQAEKGELHKHNTLVHKGQIAESVAVARKLVARYPKDSECWRALSISLHK
NSQFREVIPAARKAVELDPNDVICRLLLSDTLRHTGALAEAETQVRELLAIVPDHAEAHR
ILGVTLIALGKRAEAIASCQRAADLAPRSAAVHSSLGTLYLGIGAMDLAEKALRLSLELE
PTNSNARSNLLFCLTHNSTIDKAALYKEHCVFGQIHDVPAASNRRYSNKRNPDRKLRIGF
VSGDFCNHAVAYYFLPIVRHLSRDPNLSLHFYYTFGLQDHMTEQLRAHAHAWNAVADISD
AALVKKIRDDNIDIAVDLSGHTAHTRIVALAQKPAPVQASWIGYPGTTGMAAFDYYISDR
FVAPIDEFTEQFTEKLALLPSSTAYMPPPNCPPVNGLPALHKGYITYGSFNRLNKLSPEV
IALWSTILRAQPTSRMVIGAIGSKLDEETYLDWFRAEGIDTSRLTFCPRTTLPVYMQQHH
HVDLCLDTFPYVGSTTTLNALWMGVPTVTMPGISMPSRCGAGWLEQVGLHEFVARDKEEF
VQKSIDLTRDLDALSRLRIGMRDRCQGSVPFQPEKVAGGLSIALRTMWKRWCAEETPSAF
EATLPADWCPPPAPEDKPDLKSNSKADAKTDAKPETEPEVKTAA