Protein Info for H281DRAFT_02249 in Paraburkholderia bryophila 376MFSha3.1

Annotation: uncharacterized domain 1-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 134 transmembrane" amino acids 49 to 73 (25 residues), see Phobius details TIGR00369: uncharacterized domain 1" amino acids 20 to 131 (112 residues), 48.1 bits, see alignment E=5.7e-17 PF13622: 4HBT_3" amino acids 47 to 130 (84 residues), 36.3 bits, see alignment E=8.1e-13 PF03061: 4HBT" amino acids 48 to 121 (74 residues), 54.8 bits, see alignment E=1.4e-18 PF20789: 4HBT_3C" amino acids 54 to 124 (71 residues), 27.2 bits, see alignment E=6.2e-10

Best Hits

KEGG orthology group: None (inferred from 90% identity to bug:BC1001_0042)

Predicted SEED Role

"FIG00454661: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MHI7 at UniProt or InterPro

Protein Sequence (134 amino acids)

>H281DRAFT_02249 uncharacterized domain 1-containing protein (Paraburkholderia bryophila 376MFSha3.1)
MDDKEITELLDRVLAPWVRSLTLTPVKVDADSATLRLPFSGELRHSGGVICGQVFMAAAD
TAMIVAISAALGGFKPMTTVSLNISFMRAVRNGDVLITARVLRLGRNLVFGEVELLDETG
NMAVHATTTYALLA