Protein Info for H281DRAFT_02234 in Paraburkholderia bryophila 376MFSha3.1

Annotation: two component transcriptional regulator, Fis family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 230 PF00072: Response_reg" amino acids 4 to 115 (112 residues), 101.7 bits, see alignment E=2.8e-33 PF02954: HTH_8" amino acids 181 to 220 (40 residues), 25.3 bits, see alignment 1.1e-09

Best Hits

KEGG orthology group: None (inferred from 96% identity to bgf:BC1003_0077)

Predicted SEED Role

"Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M705 at UniProt or InterPro

Protein Sequence (230 amino acids)

>H281DRAFT_02234 two component transcriptional regulator, Fis family (Paraburkholderia bryophila 376MFSha3.1)
MATILVVDDEMGIRELLSEILSDEGHVVEAAENAQQAREFRLRQAPDLVLLDIWMPDTDG
VTLLKEWAAQGQLTMPVIMMSGHATIDTAVEATKIGALNFLEKPIALQKLLKAVEQGLAR
GTAAVAPGGTAAKLTSPMNSSAVASAAALPMLSSADGLGSGVLAAQTASISFDIPLRNAR
DAFERAYFEYHLARENGSMTRVAEKTGLERTHLYRKLKQLGVDLGKNKGE