Protein Info for H281DRAFT_02187 in Paraburkholderia bryophila 376MFSha3.1

Annotation: predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis /predicted sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 340 PF02625: XdhC_CoxI" amino acids 15 to 82 (68 residues), 78.7 bits, see alignment E=2.4e-26 PF13478: XdhC_C" amino acids 165 to 306 (142 residues), 132.8 bits, see alignment E=9.9e-43

Best Hits

KEGG orthology group: K07402, xanthine dehydrogenase accessory factor (inferred from 96% identity to bug:BC1001_0103)

Predicted SEED Role

"Carbon monoxide dehydrogenase F protein" in subsystem CO Dehydrogenase or Carbon monoxide dehydrogenase maturation factors

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M7G2 at UniProt or InterPro

Protein Sequence (340 amino acids)

>H281DRAFT_02187 predicted sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis /predicted sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis (Paraburkholderia bryophila 376MFSha3.1)
MDSVDLEVLKSSARWLEEGHRALLVTVVKTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIE
DDLIDRVRQRGIEQAHPEAVKYGISAEEAHRFGLPCGGTIQLVLEPLTPQSGIAELCNAV
EEGRLVARELNMNSGEARLGKALATDGVLFDGERLLTIHGPRYRMLVIGAGQLSRYLCNI
AVGLDYQVTVCDPREEYTEEWNIPGTKIVRTMPDDTVLDMKLDERCAVIALTHDPKLDDL
ALMEALKTPAFYVGALGSRRNNQARRERLKEFDLSDTELARLHGPVGIYIGSRTPPEIAV
SILAEVTAAKNGVSLPTLLQVEGAKAAREIAASGGEACSA