Protein Info for H281DRAFT_02182 in Paraburkholderia bryophila 376MFSha3.1

Annotation: xanthine dehydrogenase, molybdenum binding subunit apoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 795 PF01315: Ald_Xan_dh_C" amino acids 24 to 144 (121 residues), 104.8 bits, see alignment E=4.8e-34 PF02738: MoCoBD_1" amino acids 160 to 409 (250 residues), 264.5 bits, see alignment E=1.1e-82 PF20256: MoCoBD_2" amino acids 437 to 724 (288 residues), 312.8 bits, see alignment E=3.8e-97

Best Hits

KEGG orthology group: None (inferred from 97% identity to bgf:BC1003_0130)

Predicted SEED Role

"Carbon-monoxide dehydrogenase form II, large subunit (EC 1.2.99.2)" in subsystem CO Dehydrogenase (EC 1.2.99.2)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.2.99.2

Use Curated BLAST to search for 1.2.99.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M989 at UniProt or InterPro

Protein Sequence (795 amino acids)

>H281DRAFT_02182 xanthine dehydrogenase, molybdenum binding subunit apoprotein (Paraburkholderia bryophila 376MFSha3.1)
MNAPETHSLIGASVERKEDYRFLTGNGQYTDDILLPQQTYAVFLRSPHAHAKINSIDTTA
AKQSPGVVAIFTGADMAAENVGGLPCGWLIHSTDGKPMNEPPHPIIAHTKVRHVGDQVAL
VIADSIKAAKDAAELIEVDYDVLPAVVDTAHAADAGQPAVHDEVPDNVCYNWGHGDKAAT
DAAFAKAAHVTTLDIVNNRLVPNAIEPRAVNASYSSQDDSYTLYVANQNPHVERLLMAAF
VLSLPESKLRVIAPDVGGGFGSKIFLYAEDVALTWASKKIRRPVKWTAERSEAFLSDAHG
RDHVTKAELAMDADGKFLAMRIHTIANMGAYLSTFASSVPTILYATLLAGQYATPAIYAE
VKAVFTNTVPVDAYRGAGRPEATYVVERLVETAAREMKLDPAEIRRRNFIREFPYATPVG
LTYDTGDYETILARSLELADVKGFEARRQESERNGKRRGLGYSCYIEACGLAPSNIAGAL
GARAGLFEVGQIRVHPTGSVTVFTGSHSHGQGHETTFAQVVADRLGLPLESVEIVHGDTG
RIPFGMGTYGSRSIAVGGSAIMKALDKIETKAKKIAAHLLEAATEDIEFKDGVFRVAGTD
RTKAFAEISLAAYVPHNYPLDVLEPGLEESAFYDPSNFTYPSGAYICEVEVDPDTGVCRI
QRFTAVDDFGNVINPMIVEGQVHGGLGQGIGQAMLERCVYDNESGQLLSGSYMDYAMPHA
SDLPDFTVETAKGTPCTHNPLGVKGCGEAGAIGSPPAVINAIIDALAPLGVTDLQMPATP
HRVWSAIHAVKQAAH