Protein Info for H281DRAFT_02175 in Paraburkholderia bryophila 376MFSha3.1

Annotation: monosaccharide ABC transporter membrane protein, CUT2 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 353 transmembrane" amino acids 55 to 74 (20 residues), see Phobius details amino acids 81 to 100 (20 residues), see Phobius details amino acids 107 to 126 (20 residues), see Phobius details amino acids 132 to 153 (22 residues), see Phobius details amino acids 161 to 180 (20 residues), see Phobius details amino acids 197 to 221 (25 residues), see Phobius details amino acids 252 to 272 (21 residues), see Phobius details amino acids 279 to 300 (22 residues), see Phobius details amino acids 305 to 324 (20 residues), see Phobius details amino acids 330 to 348 (19 residues), see Phobius details PF02653: BPD_transp_2" amino acids 82 to 345 (264 residues), 119.2 bits, see alignment E=9.3e-39

Best Hits

KEGG orthology group: K10440, ribose transport system permease protein (inferred from 92% identity to bpy:Bphyt_0379)

Predicted SEED Role

"putative sugar uptake ABC transporter permease protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MFS5 at UniProt or InterPro

Protein Sequence (353 amino acids)

>H281DRAFT_02175 monosaccharide ABC transporter membrane protein, CUT2 family (Paraburkholderia bryophila 376MFSha3.1)
MAFKLDAESLQSEPQAGQEARPQPGSEASPQQASSQASQATGVRNWRRLAMQREVIVLLA
MVLFNLIFTPHFWSLQTFNVNLTQVVTIVIVGIGMTLVVATGGIDLSVGASMAISGALAP
MLFLNIPVPGGIALAFVLPVLAAALCGVFNGLLVTRLAVQPIVATLVLFIAGRGIAQVVT
DGSLQAFNTPAFQWIALGKVAGVPFQVLLMLALVVAFAWVVRKTLFGQYLLITGGNEKAA
YLSGVPTASVKLIAYTLCAALAGLAGLISISVNSSSDANVVGLGIELDAIAAVAVGGTAL
TGGKAFIGGTLVGALIIQLLRYTLLAHGIPDAAALVVKAGIIVAAVYVQRRSR