Protein Info for H281DRAFT_01471 in Paraburkholderia bryophila 376MFSha3.1

Annotation: MFS transporter, OFA family, oxalate/formate antiporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 53 to 72 (20 residues), see Phobius details amino acids 84 to 102 (19 residues), see Phobius details amino acids 108 to 129 (22 residues), see Phobius details amino acids 141 to 162 (22 residues), see Phobius details amino acids 179 to 203 (25 residues), see Phobius details amino acids 224 to 246 (23 residues), see Phobius details amino acids 260 to 280 (21 residues), see Phobius details amino acids 300 to 318 (19 residues), see Phobius details amino acids 324 to 343 (20 residues), see Phobius details amino acids 360 to 381 (22 residues), see Phobius details amino acids 389 to 409 (21 residues), see Phobius details TIGR04259: oxalate/formate antiporter" amino acids 17 to 421 (405 residues), 632.5 bits, see alignment E=1.4e-194 PF07690: MFS_1" amino acids 26 to 273 (248 residues), 84.6 bits, see alignment E=3.3e-28 amino acids 263 to 419 (157 residues), 47.8 bits, see alignment E=5.1e-17

Best Hits

KEGG orthology group: K08177, MFS transporter, OFA family, oxalate/formate antiporter (inferred from 93% identity to bgf:BC1003_4129)

Predicted SEED Role

"oxalate/formate antiporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MJM6 at UniProt or InterPro

Protein Sequence (445 amino acids)

>H281DRAFT_01471 MFS transporter, OFA family, oxalate/formate antiporter (Paraburkholderia bryophila 376MFSha3.1)
MKTDHQEGASSWIASPWVQLVFGVICMAMIANMQYGWTLFVNPINEKYQWGRAAIQVAFT
IFVVTETWLVPVEGYLVDKYGPRPVVVGGGLLCGIAWVLNSMASSLPLLYIAAAIGGVGA
GAVYGTCVGNALKWFPTRRGLAAGITAAGFGAGSAATVIPISNMIKSSGYEATFLSFGLG
QGIIVVLLGLALLAPPASLLATAKSTIKRVVYNATPREVVSSPVFWVMYLMFVMMAAGGL
MATAQLGPIAKDFGLHDSPVSLLGLTLPALTFALTIDRVLNGLTRPFFGWISDRIGRENT
MFIAFAIEAVGILALSKYGQSPVAFVVLTGIVFFAWGEIYSLFPATCGDTYGPKFAATNA
GLLYTAKGTAALLVPFTSVITAATGSWHAVFMLASGMAAASALLALLVLKPMRRAHAARH
ASPASENTYSGALISESARVSADGG