Protein Info for H281DRAFT_01435 in Paraburkholderia bryophila 376MFSha3.1

Annotation: H+/gluconate symporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 499 transmembrane" amino acids 9 to 30 (22 residues), see Phobius details amino acids 36 to 56 (21 residues), see Phobius details amino acids 66 to 85 (20 residues), see Phobius details amino acids 109 to 135 (27 residues), see Phobius details amino acids 151 to 168 (18 residues), see Phobius details amino acids 188 to 209 (22 residues), see Phobius details amino acids 270 to 292 (23 residues), see Phobius details amino acids 312 to 333 (22 residues), see Phobius details amino acids 353 to 375 (23 residues), see Phobius details amino acids 381 to 403 (23 residues), see Phobius details amino acids 475 to 496 (22 residues), see Phobius details PF02447: GntP_permease" amino acids 40 to 173 (134 residues), 37.2 bits, see alignment E=7.7e-14

Best Hits

KEGG orthology group: None (inferred from 77% identity to bge:BC1002_6273)

Predicted SEED Role

"D-beta-hydroxybutyrate permease" in subsystem Polyhydroxybutyrate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (499 amino acids)

>H281DRAFT_01435 H+/gluconate symporter (Paraburkholderia bryophila 376MFSha3.1)
MSDPVLSSTALGLGLVGMLVSLGLLIWFAYRGWSVLLLAPIAAMLAALVSGEPVLAHWTQ
TFMSSAARFLAQFFPLFLLGALFGKLMEDSGSVNAIAQFMTDKLGPRRAILAVVIGGAVV
TYGGVSLFVAFFVLAPMAQALFRAANIPRRLMPAAIALGTSTFTMSALPGTPAIQNAIPM
PFFGTTPFAAPGLGVIASVVMIGFGLWWLSRQEVAARRAGEGFGDGFGEAPDAPASAQES
SLVRERATVSQSFDPAEIERGHVSERLPPIGIAIAPLVVVVCANFAMNIFVFRHYDASYL
AEARWGGTTLSAVSGVWSVSVALALAVVVLISINGSRLGTLKESVDAGANASVLPILSVG
SLVGYGAVIAALPAFELVRAWVLGIGGGPLVSLAVAANLLAALTGSASGGLTIALDALGG
TYLQLAAQHHIDPALLHRVAVMSSGTLDSLPHNGAVVTLLSVCGTTHKQSYRDMLMVGVV
GALVALAVVIVLGSFAGSF