Protein Info for H281DRAFT_01229 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Sugar phosphate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 signal peptide" amino acids 1 to 42 (42 residues), see Phobius details transmembrane" amino acids 51 to 70 (20 residues), see Phobius details amino acids 90 to 107 (18 residues), see Phobius details amino acids 113 to 133 (21 residues), see Phobius details amino acids 145 to 166 (22 residues), see Phobius details amino acids 178 to 200 (23 residues), see Phobius details amino acids 246 to 267 (22 residues), see Phobius details amino acids 279 to 301 (23 residues), see Phobius details amino acids 313 to 331 (19 residues), see Phobius details amino acids 337 to 357 (21 residues), see Phobius details amino acids 364 to 387 (24 residues), see Phobius details amino acids 402 to 423 (22 residues), see Phobius details PF07690: MFS_1" amino acids 24 to 388 (365 residues), 163.4 bits, see alignment E=3.7e-52

Best Hits

KEGG orthology group: None (inferred from 94% identity to bug:BC1001_3865)

Predicted SEED Role

"4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)" in subsystem 4-Hydroxyphenylacetic acid catabolic pathway

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MK67 at UniProt or InterPro

Protein Sequence (441 amino acids)

>H281DRAFT_01229 Sugar phosphate permease (Paraburkholderia bryophila 376MFSha3.1)
MDPHASASLEAINSKVMRRLLPFLLLMYVLAFLDRANIGFAQKALQHDTGLSNAAFAFGA
GVFFVGYALFEVPSNLLLHRVGARAWMCRIMVTWGLVSAAMCLAHTATTFYTLRFLLGVA
EAGFFPGVIYYLTHWFPQRARARAVGMFYFGAPLAFIFGSPLSGLLLELNGALGLAGWQW
LFLVEGILATLVGVWAFWYLDNRPENARWLNEQERTSLRSALDEDARAASAHGPHRLLAA
LVDRRVLLLSLIYLLIQMSVYGVIFYLPQQVAALFGTTVGFHVGLVAALPWLCALVVTWY
VPRRADRTGGHRLWASALLVVAGLGIGVSGLAHDPAIGLVALCCAASGFIAAQPLFWTFP
TRLLTGAAAAGGIALINSLGSLGGFIAPSLRTAAEHAFSSTSAGLVVLGASSLIAALLIG
TLLRGHAQAPGKTHDLLHRAR