Protein Info for H281DRAFT_01060 in Paraburkholderia bryophila 376MFSha3.1

Annotation: KUP system potassium uptake protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 625 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 47 to 70 (24 residues), see Phobius details amino acids 102 to 127 (26 residues), see Phobius details amino acids 142 to 160 (19 residues), see Phobius details amino acids 172 to 192 (21 residues), see Phobius details amino acids 212 to 236 (25 residues), see Phobius details amino acids 248 to 270 (23 residues), see Phobius details amino acids 290 to 320 (31 residues), see Phobius details amino acids 340 to 361 (22 residues), see Phobius details amino acids 367 to 389 (23 residues), see Phobius details amino acids 396 to 416 (21 residues), see Phobius details amino acids 422 to 443 (22 residues), see Phobius details PF02705: K_trans" amino acids 15 to 546 (532 residues), 706.7 bits, see alignment E=9.3e-217

Best Hits

Swiss-Prot: 69% identical to KUP_HERAR: Probable potassium transport system protein kup (kup) from Herminiimonas arsenicoxydans

KEGG orthology group: K03549, KUP system potassium uptake protein (inferred from 69% identity to har:HEAR3308)

Predicted SEED Role

"Kup system potassium uptake protein" in subsystem Potassium homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (625 amino acids)

>H281DRAFT_01060 KUP system potassium uptake protein (Paraburkholderia bryophila 376MFSha3.1)
VTTDSNKNSMAALTLAAIGIVYGDIGTSPLYTMKEVFAKHHGLSPVPVNVLGVVSLILWG
LIIVISLKYVTLVLRADNRGEGGIMAMTALALSSVTQKSRWYYPVMLLGMVGAGLFFGDG
VITPAISVLSAIEGLEVAAPALKPYVIPVTLAVLVALYLLQRRGTAGIGKWFGPIVLVWF
ITLAAMGVANIAKNPFILIAFNPLHALGFLIHNGWLAFVALGAVVLALTGAEALYADMGH
FGKKTVRLAWFSIVAPALALNYLGQGALLLSNPAAVSNPFFLQLGPWSVYPLVVLSTMAT
VIASQATISGAFSVTQQAIALGFLPRMRIRQTSESHKGQIYIPLVNWLQLTAVILAVVGF
GSSSNLASAYGIAATATMLTTTLLTFFVVRFGWKFPLLLSVAATGFFLTIDVALFSSTSL
KIISGGWFTLTISALMVMLMLTWRRGRELVFQSLQRQLIPLDDFLQSLFINPPLRVPGTA
VFFRAEGDGVPHALLHNLLHNQVLHERTIFLTVYATDIPRVPDRERIKVVPHGHNCYQVN
VYYGFSDERDIPRALQEGRHAGLSIDPMQTSFFIARQTVLATPKAGMALWREALYSAMSR
NARDAADYFKIPPNRVIELGAQVEI