Protein Info for H281DRAFT_01006 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Fatty acid hydroxylase superfamily protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 transmembrane" amino acids 32 to 52 (21 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 118 to 142 (25 residues), see Phobius details amino acids 148 to 165 (18 residues), see Phobius details PF04116: FA_hydroxylase" amino acids 64 to 217 (154 residues), 34.2 bits, see alignment E=1.7e-12

Best Hits

KEGG orthology group: None (inferred from 89% identity to bge:BC1002_5740)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (233 amino acids)

>H281DRAFT_01006 Fatty acid hydroxylase superfamily protein (Paraburkholderia bryophila 376MFSha3.1)
MKYDEDVRTRSYRFRDEYVAATPAWYRGEMHLGFTLLFTGGVIAYCIAQLHAPTFSEWLA
VVPLFLFGNWAEWAAHRYVLHRPTKYFSMIYKRHCAVHHRFFTHVTLEYKGQRHWRALLF
PPFAPVAFVLAAVPFALLIGYVFSRNAGYIALLTMASYYLMYEGLHTLSHVTDSPLLDRM
PFVNTVRRLHVTHHDPELMATQNFNLTFPICDMLFGTRSDVADTAREPLQRSR