Protein Info for H281DRAFT_00973 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Sugar phosphate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 transmembrane" amino acids 42 to 59 (18 residues), see Phobius details amino acids 79 to 99 (21 residues), see Phobius details amino acids 107 to 125 (19 residues), see Phobius details amino acids 131 to 152 (22 residues), see Phobius details amino acids 175 to 194 (20 residues), see Phobius details amino acids 207 to 226 (20 residues), see Phobius details amino acids 263 to 284 (22 residues), see Phobius details amino acids 292 to 309 (18 residues), see Phobius details amino acids 329 to 347 (19 residues), see Phobius details amino acids 353 to 374 (22 residues), see Phobius details amino acids 382 to 401 (20 residues), see Phobius details amino acids 422 to 444 (23 residues), see Phobius details PF07690: MFS_1" amino acids 65 to 401 (337 residues), 80.6 bits, see alignment E=5.3e-27

Best Hits

KEGG orthology group: None (inferred from 88% identity to bgf:BC1003_1701)

Predicted SEED Role

"FIG00460430: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (454 amino acids)

>H281DRAFT_00973 Sugar phosphate permease (Paraburkholderia bryophila 376MFSha3.1)
VSSQPVQSSSTPAALALGEMEAGMKADAQAALQQTKGRRYTQLMLLVLAAGAIYPILYLR
QVYQPTMLEVFHITDSQLGYLYSSLGIIFLLSYLPSGWLADRIAPRMLICFSLIATGALG
LWYSSAPSFPMLMLIFGGWGLSTGLTFWAAVIKRVTMIAGTNEQGRFFGLLDGGRGLIEA
MLATIAITLFAWATQTKGETAAAGFRMVVYLYAFLCIALGVVLVLVKDPQGEQGARADAA
NRAARQRSNVLADLATLAKIPELWLVAAIVFCGYQVFWATYSFSAYLHEGDIGLTVVMAG
TITTLKLWMRPIGGIGGGFLGDRYSKVSVLVIALFLAALSLVGLMAAPRISSHVLLVFLV
LFIGILTYAIRGLYWSLLDRCNIPVSTMGLAIGLISVLGYSPDVFLPLINGYLTQTFPGV
FGYQLYFGYVAAMAALGGLAGLALRNMLNRKEVA